G582451



Basic Information


Item Value
gene id G582451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19325615 ~ 19325952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU664507
ctttgattaattgttcagcagtcttatggcttgggggtagaagctgttaaggagccttttggtcctcgTCTTGGCGTTCacgtaccacttgccatgcggtagcggagagaacagtctatgacttgggtgactggagtctttgacaattttttggggtcTTTCCTCTGAATccgcctagtatatacagtggagcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgttattttcatcataggtacacttcaactatgacagacaaaatgagagaaaaaaaatccagaaaatcacattctaggattt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU664507 True 338 lncRNA 0.42 1 19325615 19325952

Neighbor


gene id symbol gene type direction distance location
LOC110527441 NA coding downstream 144525 19176035 ~ 19181090 (-)
LOC110527100 NA coding downstream 171016 19145757 ~ 19154599 (-)
LOC118965376 NA coding downstream 180041 19142146 ~ 19145574 (-)
LOC110527440 LOC106575280 coding downstream 256777 19062829 ~ 19068838 (-)
LOC110527435 LOC106574410 coding downstream 923819 18384671 ~ 18401796 (-)
LOC110527445 nfip2 coding upstream 497679 19823631 ~ 19832571 (-)
LOC110527446 LOC106574421 coding upstream 525852 19851804 ~ 19881758 (-)
cfap221 cfap221 coding upstream 671404 19997356 ~ 20017679 (-)
LOC110527451 LOC106575269 coding upstream 702682 20028634 ~ 20038269 (-)
LOC110528808 steap3 coding upstream 712528 20038480 ~ 20046983 (-)
G582422 NA non-coding downstream 19547 19305843 ~ 19306068 (-)
G582349 NA non-coding downstream 87751 19237638 ~ 19237864 (-)
G582343 NA non-coding downstream 102073 19221619 ~ 19223542 (-)
G582279 NA non-coding downstream 185083 19140290 ~ 19140532 (-)
G582017 NA non-coding downstream 320330 19005042 ~ 19005285 (-)
G582502 NA non-coding upstream 39349 19365301 ~ 19365601 (-)
G582581 NA non-coding upstream 93913 19419865 ~ 19420099 (-)
G582590 LOC106575277 non-coding upstream 99430 19425382 ~ 19430874 (-)
G582595 NA non-coding upstream 109420 19435372 ~ 19435574 (-)
G582600 NA non-coding upstream 112759 19438711 ~ 19438934 (-)
G581174 LOC101077481 other downstream 1090577 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 1282235 18042927 ~ 18043380 (-)
G580487 NA other downstream 1925079 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 2524929 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 2764470 16559930 ~ 16635251 (-)
G583661 NA other upstream 889697 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 1446915 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 1512536 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 2095502 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 2191443 21513832 ~ 21583054 (-)

Expression



Co-expression Network