G582455


Basic Information

Item Value
gene id G582455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19328148 ~ 19328348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664511
ACAAGTCACAGTGGCTGACAGcgcatcatctgctgctgaacgacagcGCTGCATCGTGTGTCGCGGAGTGATCGTCAAGAAAACTGCAGAAAAAAAGATTCAGTGAACCGCGAAGCACACGCGCATCTCCCACTCCCACTCGcgcagctgccaaactgagcagagaACGCTGCTAAGAAGCGAGCGCAATGAACAGAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664511 True 201 lncRNA 0.55 1 19328148 19328348

Neighbor

gene id symbol gene type direction distance location
LOC110527442 LOC106575278 coding upstream 135193 19183383 ~ 19192955 (+)
LOC110527438 LOC106575281 coding upstream 746637 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 832459 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 1085985 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 1123315 18202651 ~ 18204833 (+)
LOC110527443 LOC106575277 coding downstream 97017 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 454497 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 554220 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 589097 19917445 ~ 19958310 (+)
LOC110528807 LOC106574429 coding downstream 691134 20017855 ~ 20028775 (+)
G582411 NA non-coding upstream 27114 19300819 ~ 19301034 (+)
G582252 NA non-coding upstream 90767 19222589 ~ 19237381 (+)
G582171 NA non-coding upstream 208357 19119559 ~ 19119791 (+)
G582161 NA non-coding upstream 215992 19111892 ~ 19112156 (+)
G582155 NA non-coding upstream 217765 19110128 ~ 19110383 (+)
G582552 NA non-coding downstream 74264 19402612 ~ 19402813 (+)
G582591 NA non-coding downstream 103796 19432144 ~ 19432372 (+)
G582607 NA non-coding downstream 115728 19444076 ~ 19444284 (+)
G582620 NA non-coding downstream 123199 19451547 ~ 19451847 (+)
G582652 NA non-coding downstream 142186 19470534 ~ 19470825 (+)
G581976 LOC106581475 other upstream 351149 18976678 ~ 18976999 (+)
G580997 NA other upstream 835239 18492227 ~ 18492909 (+)
G580365 NA other upstream 1511300 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1647480 17670275 ~ 17680668 (+)
G580179 NA other upstream 1927615 17398793 ~ 17400533 (+)
G583605 NA other downstream 910563 20238911 ~ 20239797 (+)
G584643 NA other downstream 1752480 21080828 ~ 21082615 (+)
G585573 NA other downstream 2624681 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 3028235 22356500 ~ 22360232 (+)

Expression


Co-expression Network