G582552



Basic Information


Item Value
gene id G582552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19402612 ~ 19402813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU664609
cctgttcaaacgcattaaaacttctgtcttgcccattcaccctctgaatggcacacatacacaatccatgtctcaattgtctcaaggcttaaaaatccttattttacctgtctccttcacttcatctacactgattgaagtggatttaacaagaggGATCAccgctttcacctggattcacctgttcagtctatgtcatgga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU664609 True 202 lncRNA 0.42 1 19402612 19402813

Neighbor


gene id symbol gene type direction distance location
LOC110527442 LOC106575278 coding upstream 209657 19183383 ~ 19192955 (+)
LOC110527438 LOC106575281 coding upstream 821101 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 906923 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 1160449 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 1197779 18202651 ~ 18204833 (+)
LOC110527443 LOC106575277 coding downstream 22552 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 380032 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 479755 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 514632 19917445 ~ 19958310 (+)
LOC110528807 LOC106574429 coding downstream 616669 20017855 ~ 20028775 (+)
G582455 NA non-coding upstream 74264 19328148 ~ 19328348 (+)
G582411 NA non-coding upstream 101578 19300819 ~ 19301034 (+)
G582252 NA non-coding upstream 165231 19222589 ~ 19237381 (+)
G582171 NA non-coding upstream 282821 19119559 ~ 19119791 (+)
G582161 NA non-coding upstream 290456 19111892 ~ 19112156 (+)
G582591 NA non-coding downstream 29331 19432144 ~ 19432372 (+)
G582607 NA non-coding downstream 41263 19444076 ~ 19444284 (+)
G582620 NA non-coding downstream 48734 19451547 ~ 19451847 (+)
G582652 NA non-coding downstream 67721 19470534 ~ 19470825 (+)
G582800 NA non-coding downstream 178957 19581770 ~ 19581980 (+)
G581976 LOC106581475 other upstream 425613 18976678 ~ 18976999 (+)
G580997 NA other upstream 909703 18492227 ~ 18492909 (+)
G580365 NA other upstream 1585764 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1721944 17670275 ~ 17680668 (+)
G580179 NA other upstream 2002079 17398793 ~ 17400533 (+)
G583605 NA other downstream 836098 20238911 ~ 20239797 (+)
G584643 NA other downstream 1678015 21080828 ~ 21082615 (+)
G585573 NA other downstream 2550216 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2953770 22356500 ~ 22360232 (+)

Expression



Co-expression Network