Gene
RNA
| Item | Value |
|---|---|
| gene id | G582581 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 19419865 ~ 19420099 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU664638 | True | 235 | lncRNA | 0.46 | 1 | 19419865 | 19420099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527441 | NA | coding | downstream | 238775 | 19176035 ~ 19181090 (-) |
| LOC110527100 | NA | coding | downstream | 265266 | 19145757 ~ 19154599 (-) |
| LOC118965376 | NA | coding | downstream | 274291 | 19142146 ~ 19145574 (-) |
| LOC110527440 | LOC106575280 | coding | downstream | 351027 | 19062829 ~ 19068838 (-) |
| LOC110527435 | LOC106574410 | coding | downstream | 1018069 | 18384671 ~ 18401796 (-) |
| LOC110527445 | nfip2 | coding | upstream | 403532 | 19823631 ~ 19832571 (-) |
| LOC110527446 | LOC106574421 | coding | upstream | 431705 | 19851804 ~ 19881758 (-) |
| cfap221 | cfap221 | coding | upstream | 577257 | 19997356 ~ 20017679 (-) |
| LOC110527451 | LOC106575269 | coding | upstream | 608535 | 20028634 ~ 20038269 (-) |
| LOC110528808 | steap3 | coding | upstream | 618381 | 20038480 ~ 20046983 (-) |
| G582502 | NA | non-coding | downstream | 54264 | 19365301 ~ 19365601 (-) |
| G582451 | NA | non-coding | downstream | 93913 | 19325615 ~ 19325952 (-) |
| G582422 | NA | non-coding | downstream | 113797 | 19305843 ~ 19306068 (-) |
| G582349 | NA | non-coding | downstream | 182001 | 19237638 ~ 19237864 (-) |
| G582343 | NA | non-coding | downstream | 196323 | 19221619 ~ 19223542 (-) |
| G582590 | LOC106575277 | non-coding | upstream | 5283 | 19425382 ~ 19430874 (-) |
| G582595 | NA | non-coding | upstream | 15273 | 19435372 ~ 19435574 (-) |
| G582600 | NA | non-coding | upstream | 18612 | 19438711 ~ 19438934 (-) |
| G582617 | NA | non-coding | upstream | 30310 | 19450409 ~ 19450901 (-) |
| G582619 | NA | non-coding | upstream | 30936 | 19451035 ~ 19451519 (-) |
| G581174 | LOC101077481 | other | downstream | 1184827 | 18217158 ~ 18235038 (-) |
| G581089 | LOC106575297 | other | downstream | 1376485 | 18042927 ~ 18043380 (-) |
| G580487 | NA | other | downstream | 2019329 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 2619179 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 2858720 | 16559930 ~ 16635251 (-) |
| G583661 | NA | other | upstream | 795550 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 1352768 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 1418389 | 20838415 ~ 20839399 (-) |
| G585240 | LOC106575179 | other | upstream | 2001355 | 21421454 ~ 21424585 (-) |
| LOC110527499 | LOC106575189 | other | upstream | 2097296 | 21513832 ~ 21583054 (-) |
