G582617


Basic Information

Item Value
gene id G582617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19450409 ~ 19450901 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664696
CTGTCTCTATCCCACTGTCACTggttctatctctctatctctatcccacTGTCATAtgttccatctgtctgtctcatcccactGTTGCTGgttatatctgtctgtctctatcccactGTCACAtgttccatctgtctgtctcatcccactGTCACTGGTtctaactgtctatctctatcccACTGTCACTggttccatctctctatccctatcCCACTGTCGCTGGTTCTATTTGTCTGTCTCTTTCCCACTGTCACTggttctatctgtctgtctctatcccactGTCACTCGTTATATttgtctgtctctatcccactGCTGATggttctatctctctgtctctatcccactgTTGTTAGTtatatctgtctttctctttcccactGTCACTggttctatctgtctgtctctatcccactGTCACTCGTTATATttgtctgtctctatcccactGTCACTggttctatctctctatctctatcccacTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664696 True 493 lncRNA 0.45 1 19450409 19450901

Neighbor

gene id symbol gene type direction distance location
LOC110527441 NA coding downstream 269319 19176035 ~ 19181090 (-)
LOC110527100 NA coding downstream 295810 19145757 ~ 19154599 (-)
LOC118965376 NA coding downstream 304835 19142146 ~ 19145574 (-)
LOC110527440 LOC106575280 coding downstream 381571 19062829 ~ 19068838 (-)
LOC110527435 LOC106574410 coding downstream 1048613 18384671 ~ 18401796 (-)
LOC110527445 nfip2 coding upstream 372730 19823631 ~ 19832571 (-)
LOC110527446 LOC106574421 coding upstream 400903 19851804 ~ 19881758 (-)
cfap221 cfap221 coding upstream 546455 19997356 ~ 20017679 (-)
LOC110527451 LOC106575269 coding upstream 577733 20028634 ~ 20038269 (-)
LOC110528808 steap3 coding upstream 587579 20038480 ~ 20046983 (-)
G582600 NA non-coding downstream 11475 19438711 ~ 19438934 (-)
G582595 NA non-coding downstream 14835 19435372 ~ 19435574 (-)
G582590 LOC106575277 non-coding downstream 19535 19425382 ~ 19430874 (-)
G582581 NA non-coding downstream 30310 19419865 ~ 19420099 (-)
G582502 NA non-coding downstream 84808 19365301 ~ 19365601 (-)
G582619 NA non-coding upstream 134 19451035 ~ 19451519 (-)
G582624 NA non-coding upstream 2860 19453761 ~ 19453987 (-)
G582637 NA non-coding upstream 10380 19461281 ~ 19461522 (-)
G582651 NA non-coding upstream 18572 19469473 ~ 19469806 (-)
G582668 NA non-coding upstream 31807 19482708 ~ 19483192 (-)
G581174 LOC101077481 other downstream 1215371 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 1407029 18042927 ~ 18043380 (-)
G580487 NA other downstream 2049873 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 2649723 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 2889264 16559930 ~ 16635251 (-)
G583661 NA other upstream 764748 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 1321966 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 1387587 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 1970553 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 2066494 21513832 ~ 21583054 (-)

Expression


Co-expression Network