G582673


Basic Information

Item Value
gene id G582673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19487191 ~ 19487757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664757
CTACATAACAACAACGtgacaaccgtgaagctaatgcaTAATCGTGCTGACacaaacactacacatagacaatcacccacaatgacaaaacaggctacctaaatatggttcccaatcagagacaatgactaacacctgcctctgattgagaatcatatcaggccaaacacagaaacagacaaactagacaaacaacatagaatgcccactcaaatcacaccctgaccaaacaaaacctataaacatacaaagcaaactatggtcagggtgtgacatggaggaacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttttttctaattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggtctctctcatctttttaagtgggagaacttgcacaattggtggctgacaaaatacttttttgccccactgtatgtgtatgtgtatgtgtatatgtatgcatacgtgtatggatatatatgtttaccccaaaaatatgggggattggaaatgatgcagacaattac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664757 True 567 lncRNA 0.37 1 19487191 19487757

Neighbor

gene id symbol gene type direction distance location
LOC110527441 NA coding downstream 306101 19176035 ~ 19181090 (-)
LOC110527100 NA coding downstream 332592 19145757 ~ 19154599 (-)
LOC118965376 NA coding downstream 341617 19142146 ~ 19145574 (-)
LOC110527440 LOC106575280 coding downstream 418353 19062829 ~ 19068838 (-)
LOC110527435 LOC106574410 coding downstream 1085395 18384671 ~ 18401796 (-)
LOC110527445 nfip2 coding upstream 335874 19823631 ~ 19832571 (-)
LOC110527446 LOC106574421 coding upstream 364047 19851804 ~ 19881758 (-)
cfap221 cfap221 coding upstream 509599 19997356 ~ 20017679 (-)
LOC110527451 LOC106575269 coding upstream 540877 20028634 ~ 20038269 (-)
LOC110528808 steap3 coding upstream 550723 20038480 ~ 20046983 (-)
G582668 NA non-coding downstream 3999 19482708 ~ 19483192 (-)
G582651 NA non-coding downstream 17385 19469473 ~ 19469806 (-)
G582637 NA non-coding downstream 25669 19461281 ~ 19461522 (-)
G582624 NA non-coding downstream 33204 19453761 ~ 19453987 (-)
G582619 NA non-coding downstream 35672 19451035 ~ 19451519 (-)
G582686 NA non-coding upstream 11199 19498956 ~ 19499159 (-)
G582807 NA non-coding upstream 98553 19586310 ~ 19586555 (-)
G582810 NA non-coding upstream 101369 19589126 ~ 19589369 (-)
G582863 NA non-coding upstream 134800 19622557 ~ 19622956 (-)
G582872 NA non-coding upstream 142731 19630488 ~ 19630705 (-)
G581174 LOC101077481 other downstream 1252153 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 1443811 18042927 ~ 18043380 (-)
G580487 NA other downstream 2086655 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 2686505 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 2926046 16559930 ~ 16635251 (-)
G583661 NA other upstream 727892 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 1285110 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 1350731 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 1933697 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 2029638 21513832 ~ 21583054 (-)

Expression


Co-expression Network