G582800


Basic Information

Item Value
gene id G582800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19581770 ~ 19581980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664886
ttctctgttctgataaaaccaagactgaactctttggcctgaatgccaagcgtcacatctgtaggaaacctggcaccattactacggtaaagcatggtggtggcagcatcatgctgtggggatgtttttcagcggtagggactaggagactagtaaggatcaagggaaagatgaatggagcaaagtacagagagatcattgacgaaaacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664886 True 211 lncRNA 0.46 1 19581770 19581980

Neighbor

gene id symbol gene type direction distance location
LOC110527443 LOC106575277 coding upstream 150895 19425365 ~ 19430875 (+)
LOC110527442 LOC106575278 coding upstream 388815 19183383 ~ 19192955 (+)
LOC110527438 LOC106575281 coding upstream 1000259 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 1086081 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 1339607 18205301 ~ 18242163 (+)
LOC110527444 LOC106575275 coding downstream 200865 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 300588 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 335465 19917445 ~ 19958310 (+)
LOC110528807 LOC106574429 coding downstream 437502 20017855 ~ 20028775 (+)
LOC110527452 LOC106575339 coding downstream 480996 20062976 ~ 20064980 (+)
G582652 NA non-coding upstream 110945 19470534 ~ 19470825 (+)
G582620 NA non-coding upstream 129923 19451547 ~ 19451847 (+)
G582607 NA non-coding upstream 137486 19444076 ~ 19444284 (+)
G582591 NA non-coding upstream 149398 19432144 ~ 19432372 (+)
G582552 NA non-coding upstream 178957 19402612 ~ 19402813 (+)
G582804 NA non-coding downstream 2539 19584519 ~ 19584764 (+)
G582836 NA non-coding downstream 22598 19604578 ~ 19604865 (+)
G582861 NA non-coding downstream 41054 19623034 ~ 19623383 (+)
G582874 NA non-coding downstream 49293 19631273 ~ 19631478 (+)
G582887 NA non-coding downstream 64427 19646407 ~ 19646685 (+)
G581976 LOC106581475 other upstream 604771 18976678 ~ 18976999 (+)
G580997 NA other upstream 1088861 18492227 ~ 18492909 (+)
G580365 NA other upstream 1764922 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1901102 17670275 ~ 17680668 (+)
G580179 NA other upstream 2181237 17398793 ~ 17400533 (+)
G583605 NA other downstream 656931 20238911 ~ 20239797 (+)
G584643 NA other downstream 1498848 21080828 ~ 21082615 (+)
G585573 NA other downstream 2371049 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2774603 22356500 ~ 22360232 (+)

Expression


Co-expression Network