G582874


Basic Information

Item Value
gene id G582874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19631273 ~ 19631478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664960
cattcaaacagcactttcatgcatttgccagcagctgtttatgacttccaagattaggcttgtgtaaccgatgtgaaatggctagctagttagcggggtgcgcgctaatagcgtttcaaacgtcactcgctctgagacttggagtggttgttccccttgctctgcaagggccgtggcttttgtggagcgatgggtaacgctgcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664960 True 206 lncRNA 0.50 1 19631273 19631478

Neighbor

gene id symbol gene type direction distance location
LOC110527443 LOC106575277 coding upstream 200398 19425365 ~ 19430875 (+)
LOC110527442 LOC106575278 coding upstream 438318 19183383 ~ 19192955 (+)
LOC110527438 LOC106575281 coding upstream 1049762 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 1135584 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 1389110 18205301 ~ 18242163 (+)
LOC110527444 LOC106575275 coding downstream 151367 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 251090 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 285967 19917445 ~ 19958310 (+)
LOC110528807 LOC106574429 coding downstream 388004 20017855 ~ 20028775 (+)
LOC110527452 LOC106575339 coding downstream 431498 20062976 ~ 20064980 (+)
G582861 NA non-coding upstream 7890 19623034 ~ 19623383 (+)
G582836 NA non-coding upstream 26408 19604578 ~ 19604865 (+)
G582804 NA non-coding upstream 46509 19584519 ~ 19584764 (+)
G582800 NA non-coding upstream 49293 19581770 ~ 19581980 (+)
G582652 NA non-coding upstream 160448 19470534 ~ 19470825 (+)
G582887 NA non-coding downstream 14929 19646407 ~ 19646685 (+)
G583045 NA non-coding downstream 130960 19762438 ~ 19762843 (+)
G583049 NA non-coding downstream 137998 19769476 ~ 19769731 (+)
G583053 NA non-coding downstream 141449 19772927 ~ 19773242 (+)
G583058 NA non-coding downstream 148505 19779983 ~ 19780230 (+)
G581976 LOC106581475 other upstream 654274 18976678 ~ 18976999 (+)
G580997 NA other upstream 1138364 18492227 ~ 18492909 (+)
G580365 NA other upstream 1814425 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1950605 17670275 ~ 17680668 (+)
G580179 NA other upstream 2230740 17398793 ~ 17400533 (+)
G583605 NA other downstream 607433 20238911 ~ 20239797 (+)
G584643 NA other downstream 1449350 21080828 ~ 21082615 (+)
G585573 NA other downstream 2321551 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2725105 22356500 ~ 22360232 (+)

Expression


Co-expression Network