G583059


Basic Information

Item Value
gene id G583059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19780407 ~ 19780612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665147
ATAGTaatgtctctttgtttctctATCTCTTATTTTTACATCATGAGAAAAACGAAACAAACTGTGTCTTAACCCAGGTAAATGAACAGGTAAAGtaacagtaaaaaataaagacagaCAAGATAGCTGTGGAATTAATTGATAAACATGCTATTTTGTTCCATTAGCGAACTCCCATTCATTTCAACCCCATACAGTGTAAGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665147 True 206 lncRNA 0.33 1 19780407 19780612

Neighbor

gene id symbol gene type direction distance location
LOC110527443 LOC106575277 coding upstream 349532 19425365 ~ 19430875 (+)
LOC110527442 LOC106575278 coding upstream 587452 19183383 ~ 19192955 (+)
LOC110527438 LOC106575281 coding upstream 1198896 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 1284718 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 1538244 18205301 ~ 18242163 (+)
LOC110527444 LOC106575275 coding downstream 2233 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 101956 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 136833 19917445 ~ 19958310 (+)
LOC110528807 LOC106574429 coding downstream 238870 20017855 ~ 20028775 (+)
LOC110527452 LOC106575339 coding downstream 282364 20062976 ~ 20064980 (+)
G583058 NA non-coding upstream 177 19779983 ~ 19780230 (+)
G583053 NA non-coding upstream 7165 19772927 ~ 19773242 (+)
G583049 NA non-coding upstream 10676 19769476 ~ 19769731 (+)
G583045 NA non-coding upstream 17564 19762438 ~ 19762843 (+)
G582887 NA non-coding upstream 133722 19646407 ~ 19646685 (+)
G583064 NA non-coding downstream 9345 19789957 ~ 19790203 (+)
G583068 NA non-coding downstream 19003 19799615 ~ 19799837 (+)
G583072 NA non-coding downstream 22365 19802977 ~ 19803263 (+)
G583078 NA non-coding downstream 28745 19809357 ~ 19809718 (+)
G583079 NA non-coding downstream 29815 19810427 ~ 19810751 (+)
G581976 LOC106581475 other upstream 803408 18976678 ~ 18976999 (+)
G580997 NA other upstream 1287498 18492227 ~ 18492909 (+)
G580365 NA other upstream 1963559 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 2099739 17670275 ~ 17680668 (+)
G580179 NA other upstream 2379874 17398793 ~ 17400533 (+)
G583605 NA other downstream 458299 20238911 ~ 20239797 (+)
G584643 NA other downstream 1300216 21080828 ~ 21082615 (+)
G585573 NA other downstream 2172417 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2575971 22356500 ~ 22360232 (+)

Expression


Co-expression Network