G583186


Basic Information

Item Value
gene id G583186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 19847720 ~ 19851609 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665283
TTGTGATGCTTTATCACgtgagtgtatatatattttttgtcttgGTCAGATAATATAATTTTCAAGTGCACATACAGTATTTGCAAATTTTACAGTGAAGTGGTCCTGTTAAtgtatgtctatgtacagtgtattattattagtagtggtgTTGCTATTATTGCATAGGTGCAAATTAATGTCTACTGTTGAGGGTTTAATATCTCAGGTTCTGCATTTTGCTAATTGGCAACCATTACGTTTTCAAAATCCTGTCAAACAGTCTTGAAATTGGAATATTGATTGGTAATCTAAACATACCCACCACTGCACTCAATGAATCTGTCACGGTTCACATCTTTTCTACCTGATATTGTGAATGCATGACAGGGTTTCACTCAGTAAATTGACGGCATTCCTTTAAATCAGCTCCATCTTTGATAGCTGTCGAACTCTCCTGCCAACGGCCTagtgctatatactgtatcacatgTCTTTGTGAAATGTTCAGATATTTTTGTAAGGTGTAACGTTGACTAAAGCTACAGTATGTTAACTCTCTCTCTTGCGCGCTAGCATTGTAGAAAATAGATTCCCTTGGTTCACAGCATTCCATGGAAGTGGCAGGGTTGAGGGTTTGTTTGGTTTTTAGCATTTGACAGATATTTACTGCTGAAATGACCTCCAACTGTAGATATAATGTATATAACAGATTTGATGTAAGTGTGCATTTTTTTTAATTTGGGGTTGTCTAATTAGTTGTCGGTTTTTATAAGACAATGTGAAATACCGATGACATTTCTGTCCTCTTTAAATGCTTGAAAATCTATTGAATGAACATGTGGGGTTgatcctattttttttttattcctttCTTCAGGTTTAGTAGCTATGAATGCCATGAGACTATCTGTCAAATGCACCGACAATATAAATAATACAACGAAACACATTGTAAATCAAGGGCATTGCGAACCACTGATATACACAGTACATCATCTATTTCTATCATCTATTCTGCACAGCTATCATAGAAGCACATACGATGTGTCAGTCTCTCAGTTTTACAACTGATGCATGAATTCTGTTCTACAGGGCAAGGACAACGAGCCATGGTCATTAGATTGTAACCAAACATCTAACGCATCCCATTAGGAAATGTAATCAACGGCATGGAAGTAGCTAACATTTGGTGAAACATTGCCGTTGTTCATCTCATGCTGCTCTAGGCGAGAGACGATGCCTAGATGGCACTGTCTCTTGTTTCTCTATGCATGTTAAATTGCATGAGTAATGTCGATTAAAAACAAAAACTTAACCCTACCATCTTAAACCTGTAGCGCAGGTTACAAGTACAGTTCCAAGAGATTGTGATAAACTGCCATTCACTGGTTGGTTACAGAGCAACCAATCATATCCTGGGGTCAATGGCTGGGATTCACAACGACAGTCTTCAAATATATAACACATTTATATACGCATAAAGAATAAATCGCGTGCCCATGTATTTTACCATTACCAACTTGCAGCCAATTGCTTATAGTAGTGACATGTATCTCTGGTATGTAAATATGCTTTGCTACTTGATCATTAAGCTTGTTGTGTGTTTTGGGTTTGAGTGATATAATGGTAATGTGTGTGGTTGCACACGCTGGCCTATAACAGTTCCAGACCCCAGGGTTTCCCTTCTCTACTGTGTAGATGAGGCCGTGTTTGCTGGGTCTTGGTGTAAGATGACTAATATCTCTTGGTCTTGGTGTAAGATGAGTCATTTATATTGTTCTTGGTGCAAGATGAATCAAATATCTTGTTCTTGGTGTAAGATGAGTAATCTTTCCCGAGACGTAAAGACTTGAGTTAGCCCTTCAGGTCTTGTGGCATGCAGGAGACCTGGGTTTGAATCCCAGTCAGTCACATTGGCACCTTCAATCTGACACTGTTTCATGCATTAAGTGCACTCATCTTTGCTGGCTTCTAATGTTGTCTGGCCCATTATGGAATGTcaacatgttctgttctgccatAAATGTATATTTAGGTATAGATATCTGTGTTTATGTTTCTCTCCCTTATTTCTTTAGGTTATAATGTTGCTCTATTAATGAAATAATATCAATTGTATGACAGTAATATCGGGTTTTGCATCCATTCAAATCCATGTTTTCTGTAACACTTCTGTTATAAGCTATAGCAACAGGATGAACAATGGACAGACTTCAAAGACAACATTTCTTGTTCCTAAtgcatttctgttgaatgattgAATCTAGACAAAGCCCAATAGTTTATGTTTTATATGTCAGGTGAAGATAAACAAATGATTACCAGTATTCCTGGATTGTGATTAAAACTGTATTTatcaatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgcatgttcTGATATGCCTTCCGTGACTGTAAATACACAAAATAGGTGTTCATAGCCATGTACACTGAATATAAATGCATTTTTATCTCTCACAGTGTACATATTAACTCTTAAGGAAGTGTTTTTTCATTACTCAAAGGGTTTAATTTAACACTGGATTAGTGGGATTCATGTGTACACTGAaagtgttacatttaacactgtCCCAGTTTAATTTGCTACAATTATGATCTTCGACGGCAATCATGGACTGTAGGTCTGTGCCTCCTACAAATTGGGTATTCATACTCTAGTACACGTCCAAAAAATGCTTCACACTCTGCCTCTCCACCATCCAGCCATCTAGCTTAATTAAAGCAAGGGCCCTGGGCCGTGACCTACAGTATAAGTCGTCCATTACTCTGAAGTTGGACCCGCTAGACATACGATCATTTTATCTGAGTAAGGAACCATCCACACTTTAGGTCAACCTGTCTGGGGCACAGAACCAACAACACACTTAACCCGCACGGTCCGAGGGATTACACTATGTCATAAAGTGCCCCAAAACACAACCCTTTCCCTTCAAAGTTATGGCATCAATGAATCATGCGACTCCAAGTCCTGAATTTATCatactgtttatttttatttaactaggcaagtcagttaagaacaaattcttatttacaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaacgacagattttgttttaccttgtcagctcaggaatttgatctagcagcctttcggttactggcccaacgctctaaccactaggcttgcTGCCACCCCTGTTACTAGTAAGCCCAACAGGGTTTTGTATGCCAAAGTGCAGCCTACTCATCGTGGTTGccgccaacaaaacaacacatCTAAGGAGACGTTGAGATGGAGCCAATAAAACTCACTTATACACTATAGGCAATATAACACGATAGAGACATAAGTGTTATGACTCTGTTACCAGTAACCTTATGGGGCAagtggtgtgattgtgtgggtcGCCACAGAATACACCTATTTTGTGTAGGAGGTGTGGTTGATAAATTGGTTGTAATAACAGGCTGAGGGAAAATGATTCTGTATTTCCTAGAGGGGATCTCAACCCAGCATTAGAGTGTACAGCTGCCAGAAAGGTGACAGAGGCAACTGTGGaataattgtcacaccctgatctgtttcacatgtctttgtgattgtctccaccccccgcctggtgtcacccatcttccccattatcccctgtgtatttatatctgtgttctctgtatgtctgttgccagttcgtcttgtttgtcaatcAACCAGTGGTTTTGTCTCAgctcatctctctttttctcaccttcctggttttgacccttgcctgtcctgactctgagcccacctgcctgactactctgtctgcctctgagcctgcctgccgtcctgtacctttgccccacctctgttTTACTGACCCCTGGccgccttgacctgtctattgcctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665283 True 3890 lncRNA 0.40 1 19847720 19851609
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110527445 nfip2 coding downstream 15149 19823631 ~ 19832571 (-)
LOC110527441 NA coding downstream 666630 19176035 ~ 19181090 (-)
LOC110527100 NA coding downstream 693121 19145757 ~ 19154599 (-)
LOC118965376 NA coding downstream 702146 19142146 ~ 19145574 (-)
LOC110527440 LOC106575280 coding downstream 778882 19062829 ~ 19068838 (-)
LOC110527446 LOC106574421 coding upstream 195 19851804 ~ 19881758 (-)
cfap221 cfap221 coding upstream 145747 19997356 ~ 20017679 (-)
LOC110527451 LOC106575269 coding upstream 177025 20028634 ~ 20038269 (-)
LOC110528808 steap3 coding upstream 186871 20038480 ~ 20046983 (-)
LOC110527101 LOC106575264 coding upstream 198394 20050003 ~ 20055651 (-)
G583223 NA non-coding downstream 3891 19843434 ~ 19843829 (-)
G583188 NA non-coding downstream 24224 19819710 ~ 19823496 (-)
G583190 NA non-coding downstream 33222 19812037 ~ 19814498 (-)
G583206 NA non-coding downstream 56903 19790579 ~ 19790817 (-)
G583199 NA non-coding downstream 73683 19773815 ~ 19774037 (-)
G583246 NA non-coding upstream 25571 19877180 ~ 19909687 (-)
G583255 LOC108249475 non-coding upstream 37780 19889389 ~ 19892589 (-)
G583260 NA non-coding upstream 42688 19894297 ~ 19894565 (-)
G583277 LOC106563719 non-coding upstream 60650 19912259 ~ 19914265 (-)
G583337 NA non-coding upstream 144719 19996328 ~ 19996532 (-)
G581174 LOC101077481 other downstream 1612682 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 1804340 18042927 ~ 18043380 (-)
G580487 NA other downstream 2447184 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 3047034 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 3286575 16559930 ~ 16635251 (-)
G583661 NA other upstream 364040 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 921258 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 986879 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 1569845 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 1665786 21513832 ~ 21583054 (-)

Expression

G583186 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G583186 Expression in each Bioproject

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G583186 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network