G583427


Basic Information

Item Value
gene id G583427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20065910 ~ 20066495 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665545
gtctaaaagtgtttCTGAAGAACACCACCCACGcaatccgaagaacaccatcccaaccgtgaagcacgggggtggcagcatcatgttgtgagggtgctttgctgcaggagggactggtgcacttcacaaaatagatggcatcatgagggaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcaggaacttaaagcttggtcgcaaatgggtcttccaattggacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggaatggccatcacaaagccctgacctcaattctatagaacatAAAAAAGCatgtggaggcctacaaacccgactcagttacaccagctcagtcaggaggaatgggccaaaattcaaccaacttattgtgggaagcttgtagaaggctacccgaaacgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattcagtgtatgtaaacttctgacccactgggaatgtgattaaataaataaaagctgaaataaatcattctctctactat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665545 True 586 lncRNA 0.43 1 20065910 20066495

Neighbor

gene id symbol gene type direction distance location
LOC110527101 LOC106575264 coding downstream 10259 20050003 ~ 20055651 (-)
LOC110528808 steap3 coding downstream 18927 20038480 ~ 20046983 (-)
LOC110527451 LOC106575269 coding downstream 27641 20028634 ~ 20038269 (-)
cfap221 cfap221 coding downstream 48231 19997356 ~ 20017679 (-)
LOC110527446 LOC106574421 coding downstream 184152 19851804 ~ 19881758 (-)
LOC110527454 NA coding upstream 98780 20165275 ~ 20173637 (-)
LOC118965267 NA coding upstream 135105 20201600 ~ 20206635 (-)
LOC110527455 LOC106575263 coding upstream 151400 20217895 ~ 20265255 (-)
LOC110527456 LOC106575261 coding upstream 231178 20297673 ~ 20310091 (-)
LOC110527458 LOC106575259 coding upstream 260304 20326799 ~ 20337014 (-)
G583412 NA non-coding downstream 9495 20056208 ~ 20056415 (-)
G583389 NA non-coding downstream 39044 20026650 ~ 20026866 (-)
G583388 NA non-coding downstream 39760 20025757 ~ 20026150 (-)
G583337 NA non-coding downstream 69378 19996328 ~ 19996532 (-)
G583449 NA non-coding upstream 18820 20085315 ~ 20085516 (-)
G583461 NA non-coding upstream 24522 20091017 ~ 20091243 (-)
G583481 en1 non-coding upstream 27361 20093856 ~ 20098023 (-)
G583488 NA non-coding upstream 41784 20108279 ~ 20108586 (-)
G583495 NA non-coding upstream 48445 20114940 ~ 20115184 (-)
G581174 LOC101077481 other downstream 1830872 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 2022530 18042927 ~ 18043380 (-)
G580487 NA other downstream 2665374 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 3265224 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 3504765 16559930 ~ 16635251 (-)
G583661 NA other upstream 149154 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 706372 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 771993 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 1354959 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 1450900 21513832 ~ 21583054 (-)

Expression


Co-expression Network