G583447


Basic Information

Item Value
gene id G583447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20080873 ~ 20081191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665565
CTACCATTGGCTCGGACTCTGACCAATCACAGAGTTCGAATGAAACAGTAGTACACAGTTCCTTTTGAAAGGGACAGTGAGCGGGTCAAGACACTCCGGCACCAATACATCCAGGTATGGTGTCTATCCAAGATGTCTTGTTCTATAGTGAGTTTTACACTATGCTACTCTACATGTAAACATGagttacagtacatacagtaggaCATACTGAAAAGCATttacacatactgtgtttgatttcattcagagagtcatggagttgGAGGCTAATCAGACCCCACATTAAATAATTTATGTAGACGAGGCTTGGTTTAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC109198913

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665565 True 319 lncRNA 0.41 1 20080873 20081191

Neighbor

gene id symbol gene type direction distance location
LOC110527452 LOC106575339 coding upstream 15893 20062976 ~ 20064980 (+)
LOC110528807 LOC106574429 coding upstream 52098 20017855 ~ 20028775 (+)
LOC110527448 LOC106574424 coding upstream 122563 19917445 ~ 19958310 (+)
LOC110527447 LOC106575273 coding upstream 165692 19882568 ~ 19915181 (+)
LOC110527444 LOC106575275 coding upstream 292869 19782845 ~ 19788004 (+)
LOC110527453 en1 coding downstream 12603 20093794 ~ 20098063 (+)
LOC118965349 NA coding downstream 80889 20162080 ~ 20162895 (+)
LOC110527457 NA coding downstream 228872 20301287 ~ 20315887 (+)
LOC110527460 LOC106575256 coding downstream 446237 20527428 ~ 20539663 (+)
LOC110527464 LOC106575252 coding downstream 552944 20634135 ~ 20658344 (+)
G583444 NA non-coding upstream 1023 20079639 ~ 20079850 (+)
G583413 NA non-coding upstream 22698 20056890 ~ 20058175 (+)
G583398 NA non-coding upstream 39171 20041501 ~ 20041702 (+)
G583381 NA non-coding upstream 53645 20026887 ~ 20027228 (+)
G583498 NA non-coding downstream 36591 20117782 ~ 20118107 (+)
G583591 NA non-coding downstream 134469 20215660 ~ 20249980 (+)
G583598 LOC106575263 non-coding downstream 144521 20225712 ~ 20227864 (+)
G583600 LOC106575263 non-coding downstream 150390 20231581 ~ 20233414 (+)
G583603 NA non-coding downstream 154470 20235661 ~ 20236582 (+)
G581976 LOC106581475 other upstream 1103874 18976678 ~ 18976999 (+)
G580997 NA other upstream 1587964 18492227 ~ 18492909 (+)
G580365 NA other upstream 2264025 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 2400205 17670275 ~ 17680668 (+)
G583605 NA other downstream 157720 20238911 ~ 20239797 (+)
G584643 NA other downstream 999637 21080828 ~ 21082615 (+)
G585573 NA other downstream 1871838 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2275392 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 2605298 22684527 ~ 22722539 (+)

Expression


Co-expression Network