G583661


Basic Information

Item Value
gene id G583661
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20215649 ~ 20249985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665792
ataattatgtggatatattgacgcaacatctcaagacatcagtcaagaagttaatgcttggtcataaatgggtcttccaaatggacaatgaccccgagcagacttccaaatttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagataatttgtgggcagaactgaaaaagtgtgtgcgagtaaggaggcctacaaacctgactcagttacaccagctctatcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacccaaaatgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctggaataaattattctctctactattattctgacatttcacattctttaaataaagtggcgatcctaactgacctaagacagggattttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctgaggtgtatgtaaacttccgacttcaactgtagctgatGTGGGgtaatgtgatgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtttggtttgtgtgtgcgtgtgtgcgtgcttgcaacAAACAGGACTACAGATCATGGAGGCTTTCTATTTGTAGAATAACGCAGTGGTTGGACCAAATCTGAGGGTtaaatgtcatttttgttttacattttttaaattccacTCAGTGAAACACTGGTTTCTCCCTCCACAGCTTTTACCATCAGCTGTATCATCATACTGTGAAAAGCATACTTTTGTTGAAGCCCACGTTTATCCACATTATTCCAATTGTAATAAGCATGAACACAACTCTACCGCTTTCCGTCTGTCTTATCCCATTCTTTATGTGTGCTCTAATAATGTCTACATTTTACTTTCAGTTACTGACACGCACATATATAGACACGTATTAGGTGATGTTACATAGGACATAACACCATGAATTATTTGATAATGTGCTATTTTTCATGTCTTATGATATGCTGTTTTCAGCTGTACGTTTCCAGTATACAGTGTGTATATTTTTGAGATATGTGTCGCAGGGGTTGATCTATCAGAATATTGTACGAGTTTACGGTCTTTGTTTTTACTGGGGTTTGTTACACTTCAGATGAATAGCCATTGTCTTTGGATTGATTGAACAATAAAGAAGTTTAGAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665792 True 1282 TUCP 0.38 2 20215649 20249985

Neighbor

gene id symbol gene type direction distance location
LOC118965267 NA coding downstream 9014 20201600 ~ 20206635 (-)
LOC110527454 NA coding downstream 42012 20165275 ~ 20173637 (-)
LOC110527101 LOC106575264 coding downstream 159998 20050003 ~ 20055651 (-)
LOC110528808 steap3 coding downstream 168666 20038480 ~ 20046983 (-)
LOC110527451 LOC106575269 coding downstream 177380 20028634 ~ 20038269 (-)
LOC110527456 LOC106575261 coding upstream 47688 20297673 ~ 20310091 (-)
LOC110527458 LOC106575259 coding upstream 76814 20326799 ~ 20337014 (-)
LOC110527459 LOC106575258 coding upstream 87567 20337552 ~ 20517367 (-)
trnaa-ugc-21 NA coding upstream 181464 20431449 ~ 20431522 (-)
LOC110527462 LOC106575257 coding upstream 271542 20521527 ~ 20528893 (-)
G583566 NA non-coding downstream 41188 20174258 ~ 20174461 (-)
G583495 NA non-coding downstream 100465 20114940 ~ 20115184 (-)
G583488 NA non-coding downstream 107063 20108279 ~ 20108586 (-)
G583481 en1 non-coding downstream 117626 20093856 ~ 20098023 (-)
G583703 NA non-coding upstream 18449 20268434 ~ 20268663 (-)
G583719 NA non-coding upstream 37861 20287846 ~ 20288083 (-)
G583663 NA non-coding upstream 46834 20296819 ~ 20297267 (-)
G583731 NA non-coding upstream 62128 20312113 ~ 20312344 (-)
G583734 NA non-coding upstream 67678 20317663 ~ 20317915 (-)
G581174 LOC101077481 other downstream 1980611 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 2172269 18042927 ~ 18043380 (-)
G580487 NA other downstream 2815113 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 3414963 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 3654504 16559930 ~ 16635251 (-)
otos2 LOC106575250 other upstream 522882 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 588503 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 1171469 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 1267410 21513832 ~ 21583054 (-)
LOC110527506 LOC106575199 other upstream 1842827 22089741 ~ 22163995 (-)

Expression


Co-expression Network