Gene
RNA
| Item | Value |
|---|---|
| gene id | G583603 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 20235661 ~ 20236582 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Small proline-rich protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU665730 | True | 802 | lncRNA | 0.35 | 2 | 20235661 | 20236582 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965349 | NA | coding | upstream | 72766 | 20162080 ~ 20162895 (+) |
| LOC110527453 | en1 | coding | upstream | 137598 | 20093794 ~ 20098063 (+) |
| LOC110527452 | LOC106575339 | coding | upstream | 170681 | 20062976 ~ 20064980 (+) |
| LOC110528807 | LOC106574429 | coding | upstream | 206886 | 20017855 ~ 20028775 (+) |
| LOC110527448 | LOC106574424 | coding | upstream | 277351 | 19917445 ~ 19958310 (+) |
| LOC110527457 | NA | coding | downstream | 73481 | 20301287 ~ 20315887 (+) |
| LOC110527460 | LOC106575256 | coding | downstream | 290846 | 20527428 ~ 20539663 (+) |
| LOC110527464 | LOC106575252 | coding | downstream | 397553 | 20634135 ~ 20658344 (+) |
| LOC110527471 | LOC106574225 | coding | downstream | 624222 | 20860804 ~ 20868580 (+) |
| LOC110527474 | LOC106575156 | coding | downstream | 632881 | 20869463 ~ 20873915 (+) |
| G583600 | LOC106575263 | non-coding | upstream | 2247 | 20231581 ~ 20233414 (+) |
| G583598 | LOC106575263 | non-coding | upstream | 7797 | 20225712 ~ 20227864 (+) |
| G583498 | NA | non-coding | upstream | 117554 | 20117782 ~ 20118107 (+) |
| G583447 | NA | non-coding | upstream | 154470 | 20080873 ~ 20081191 (+) |
| G583444 | NA | non-coding | upstream | 155811 | 20079639 ~ 20079850 (+) |
| G583626 | NA | non-coding | downstream | 30313 | 20266895 ~ 20267139 (+) |
| G583634 | NA | non-coding | downstream | 41761 | 20278343 ~ 20278589 (+) |
| G583654 | NA | non-coding | downstream | 75291 | 20311873 ~ 20312177 (+) |
| G583818 | NA | non-coding | downstream | 206857 | 20443439 ~ 20443982 (+) |
| G581976 | LOC106581475 | other | upstream | 1258662 | 18976678 ~ 18976999 (+) |
| G580997 | NA | other | upstream | 1742752 | 18492227 ~ 18492909 (+) |
| G580365 | NA | other | upstream | 2418813 | 17813342 ~ 17816848 (+) |
| G580315 | LOC106575303 | other | upstream | 2554993 | 17670275 ~ 17680668 (+) |
| G583605 | NA | other | downstream | 2329 | 20238911 ~ 20239797 (+) |
| G584643 | NA | other | downstream | 844246 | 21080828 ~ 21082615 (+) |
| G585573 | NA | other | downstream | 1716447 | 21953029 ~ 21953269 (+) |
| c7h10orf53 | cssa17h10orf53 | other | downstream | 2120001 | 22356500 ~ 22360232 (+) |
| LOC110527523 | stat1-2 | other | downstream | 2449907 | 22684527 ~ 22722539 (+) |
