G583626


Basic Information

Item Value
gene id G583626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20266895 ~ 20267139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665754
TTGATGGCAGTATAAATAAGATAGCGTTACCCTCTAGTGGTCAAGCATGAGATGCGCATGTATGACACTCATACAGCAAGGATGACTTCAATATAATGCATTACCACTAGGCGACAGTATTATCTGCCttagttctctttctctctacgtTTTCACTCTATCTGATCGAAGCGACATGGTCTGTGGATCTGTACAGTGTGTCAACTGTTGACTATGATACACAGCTTTTTAATgcgctcctgagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665754 True 245 lncRNA 0.42 1 20266895 20267139

Neighbor

gene id symbol gene type direction distance location
LOC118965349 NA coding upstream 104000 20162080 ~ 20162895 (+)
LOC110527453 en1 coding upstream 168832 20093794 ~ 20098063 (+)
LOC110527452 LOC106575339 coding upstream 201915 20062976 ~ 20064980 (+)
LOC110528807 LOC106574429 coding upstream 238120 20017855 ~ 20028775 (+)
LOC110527448 LOC106574424 coding upstream 308585 19917445 ~ 19958310 (+)
LOC110527457 NA coding downstream 42924 20301287 ~ 20315887 (+)
LOC110527460 LOC106575256 coding downstream 260289 20527428 ~ 20539663 (+)
LOC110527464 LOC106575252 coding downstream 366996 20634135 ~ 20658344 (+)
LOC110527471 LOC106574225 coding downstream 593665 20860804 ~ 20868580 (+)
LOC110527474 LOC106575156 coding downstream 602324 20869463 ~ 20873915 (+)
G583591 NA non-coding upstream 16915 20215660 ~ 20249980 (+)
G583603 NA non-coding upstream 30313 20235661 ~ 20236582 (+)
G583600 LOC106575263 non-coding upstream 33481 20231581 ~ 20233414 (+)
G583598 LOC106575263 non-coding upstream 39031 20225712 ~ 20227864 (+)
G583498 NA non-coding upstream 148788 20117782 ~ 20118107 (+)
G583634 NA non-coding downstream 11204 20278343 ~ 20278589 (+)
G583654 NA non-coding downstream 44734 20311873 ~ 20312177 (+)
G583818 NA non-coding downstream 176300 20443439 ~ 20443982 (+)
G583826 NA non-coding downstream 190914 20458053 ~ 20458350 (+)
G583605 NA other upstream 27098 20238911 ~ 20239797 (+)
G581976 LOC106581475 other upstream 1289896 18976678 ~ 18976999 (+)
G580997 NA other upstream 1773986 18492227 ~ 18492909 (+)
G580365 NA other upstream 2450047 17813342 ~ 17816848 (+)
G584643 NA other downstream 813689 21080828 ~ 21082615 (+)
G585573 NA other downstream 1685890 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2089444 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 2419350 22684527 ~ 22722539 (+)
G586685 NA other downstream 2742922 23010061 ~ 23015120 (+)

Expression


Co-expression Network