G583634


Basic Information

Item Value
gene id G583634
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20278343 ~ 20278589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU665763
GTCTTTAGATGATTGGCATGGTATTTGATGAGAGACGCAGGCGGTTTGATTCATCTTGGACACAGTTTCCTTTGACGGAGATAAAGACAAATTGATAAAGACAAATGAAATGTGGTCTAGAGTTTTCCAAGCTCAGGGTGCGTGTTGCTATCAAATGTGTTCTGTATCTAGAACATTTTGCAGTTACTGCATTCGATCTTTGTTGCCTCCTGGTGATGAGTTTTTCGGtcgctgctcctctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU665763 True 247 lncRNA 0.43 1 20278343 20278589

Neighbor

gene id symbol gene type direction distance location
LOC118965349 NA coding upstream 115448 20162080 ~ 20162895 (+)
LOC110527453 en1 coding upstream 180280 20093794 ~ 20098063 (+)
LOC110527452 LOC106575339 coding upstream 213363 20062976 ~ 20064980 (+)
LOC110528807 LOC106574429 coding upstream 249568 20017855 ~ 20028775 (+)
LOC110527448 LOC106574424 coding upstream 320033 19917445 ~ 19958310 (+)
LOC110527457 NA coding downstream 31474 20301287 ~ 20315887 (+)
LOC110527460 LOC106575256 coding downstream 248839 20527428 ~ 20539663 (+)
LOC110527464 LOC106575252 coding downstream 355546 20634135 ~ 20658344 (+)
LOC110527471 LOC106574225 coding downstream 582215 20860804 ~ 20868580 (+)
LOC110527474 LOC106575156 coding downstream 590874 20869463 ~ 20873915 (+)
G583626 NA non-coding upstream 11204 20266895 ~ 20267139 (+)
G583591 NA non-coding upstream 28363 20215660 ~ 20249980 (+)
G583603 NA non-coding upstream 41761 20235661 ~ 20236582 (+)
G583600 LOC106575263 non-coding upstream 44929 20231581 ~ 20233414 (+)
G583598 LOC106575263 non-coding upstream 50479 20225712 ~ 20227864 (+)
G583654 NA non-coding downstream 33284 20311873 ~ 20312177 (+)
G583818 NA non-coding downstream 164850 20443439 ~ 20443982 (+)
G583826 NA non-coding downstream 179464 20458053 ~ 20458350 (+)
G583830 NA non-coding downstream 187010 20465599 ~ 20465817 (+)
G583605 NA other upstream 38546 20238911 ~ 20239797 (+)
G581976 LOC106581475 other upstream 1301344 18976678 ~ 18976999 (+)
G580997 NA other upstream 1785434 18492227 ~ 18492909 (+)
G580365 NA other upstream 2461495 17813342 ~ 17816848 (+)
G584643 NA other downstream 802239 21080828 ~ 21082615 (+)
G585573 NA other downstream 1674440 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 2077994 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 2407900 22684527 ~ 22722539 (+)
G586685 NA other downstream 2731472 23010061 ~ 23015120 (+)

Expression


Co-expression Network