G583878


Basic Information

Item Value
gene id G583878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20559261 ~ 20559660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666020
TGGAATTGCCGGAAGGACTGTTGGTTCTCGATGAACCACTGGTAACAAGCGTCTGTCCTTTGCCACTCACCGACATGTACCTCGACTCGGTCAGGCGGAGTTGCTTCTCTAGCATTTTGATTTGCTCTTTGCTTTGAGAGACAACAATCCTCTACTAATTTGCAAATCTCTGTCACGGCAGCGGAGGCTAGAATGTCCATGACGGAGCTTATCCGTTGATGCAAAACACTCGACTCAGACATTTTAAgcccttgtttttttttttaccggtCACAATTACTTAATCTATTTGGATtctaaacgtttttttttttgcagcagcTTATTCACGAAATGGTCATATTTTTAAAGAACATATGGCTTCTTGTTATCAATGTTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666020 True 380 lncRNA 0.41 2 20559261 20559660

Neighbor

gene id symbol gene type direction distance location
LOC110527460 LOC106575256 coding upstream 19598 20527428 ~ 20539663 (+)
LOC110527457 NA coding upstream 243374 20301287 ~ 20315887 (+)
LOC118965349 NA coding upstream 396366 20162080 ~ 20162895 (+)
LOC110527453 en1 coding upstream 461198 20093794 ~ 20098063 (+)
LOC110527452 LOC106575339 coding upstream 494281 20062976 ~ 20064980 (+)
LOC110527464 LOC106575252 coding downstream 74475 20634135 ~ 20658344 (+)
LOC110527471 LOC106574225 coding downstream 301144 20860804 ~ 20868580 (+)
LOC110527474 LOC106575156 coding downstream 309803 20869463 ~ 20873915 (+)
LOC110528809 LOC106575158 coding downstream 314592 20874252 ~ 20893679 (+)
LOC110527473 LOC106575157 coding downstream 334148 20893808 ~ 20941725 (+)
G583831 NA non-coding upstream 92621 20466405 ~ 20466640 (+)
G583830 NA non-coding upstream 93444 20465599 ~ 20465817 (+)
G583826 NA non-coding upstream 100911 20458053 ~ 20458350 (+)
G583818 NA non-coding upstream 115279 20443439 ~ 20443982 (+)
G583654 NA non-coding upstream 247084 20311873 ~ 20312177 (+)
G583964 NA non-coding downstream 122539 20682199 ~ 20682407 (+)
G583966 NA non-coding downstream 125520 20685180 ~ 20685438 (+)
G583970 NA non-coding downstream 132632 20692292 ~ 20692527 (+)
G583983 NA non-coding downstream 154053 20713713 ~ 20713978 (+)
G584253 NA non-coding downstream 160953 20720613 ~ 20720966 (+)
G583605 NA other upstream 319464 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 537534 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 1582262 18976678 ~ 18976999 (+)
G580997 NA other upstream 2066352 18492227 ~ 18492909 (+)
G580365 NA other upstream 2742413 17813342 ~ 17816848 (+)
G584643 NA other downstream 521168 21080828 ~ 21082615 (+)
G585573 NA other downstream 1393369 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1796923 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 2126829 22684527 ~ 22722539 (+)
G586685 NA other downstream 2450401 23010061 ~ 23015120 (+)

Expression


Co-expression Network