G584262


Basic Information

Item Value
gene id G584262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20726989 ~ 20727429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666438
CATTTCCTCATTTGTTTATTGAAGCAGGTACACACATGCCATCTCCTCagtggttatacccacgtgggtgactgaaagacgaaggaggtcagtggcggtaatgcacctaatttatgaaagttgacaatcgcaatataaagtcaagagaacaaaaagcctggaaggaagagagatgactagaaacgattcggttgactgttttatgtgtggattaattggcggagtagaggaccttgtgcatttcaggtaaaataacaactcaatgtttatatcccaggacaaattagctagcaacagcaagctagctaaataggacaaattagctagcaagtgcaagctaactagctaaattgacaTAAATGTTTAaagcttttcaacctgtccccaaattaattgaattggttcagagtttgtgatattttaacctgcgtgttgtaaTCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666438 True 441 lncRNA 0.39 1 20726989 20727429

Neighbor

gene id symbol gene type direction distance location
LOC110527464 LOC106575252 coding upstream 68645 20634135 ~ 20658344 (+)
LOC110527460 LOC106575256 coding upstream 187326 20527428 ~ 20539663 (+)
LOC110527457 NA coding upstream 411102 20301287 ~ 20315887 (+)
LOC118965349 NA coding upstream 564094 20162080 ~ 20162895 (+)
LOC110527453 en1 coding upstream 628926 20093794 ~ 20098063 (+)
LOC110527471 LOC106574225 coding downstream 133375 20860804 ~ 20868580 (+)
LOC110527474 LOC106575156 coding downstream 142034 20869463 ~ 20873915 (+)
LOC110528809 LOC106575158 coding downstream 146823 20874252 ~ 20893679 (+)
LOC110527473 LOC106575157 coding downstream 166379 20893808 ~ 20941725 (+)
LOC110527479 LOC106575163 coding downstream 306441 21033870 ~ 21044932 (+)
G584253 NA non-coding upstream 6023 20720613 ~ 20720966 (+)
G583983 NA non-coding upstream 13011 20713713 ~ 20713978 (+)
G583970 NA non-coding upstream 34462 20692292 ~ 20692527 (+)
G583966 NA non-coding upstream 41551 20685180 ~ 20685438 (+)
G583964 NA non-coding upstream 44582 20682199 ~ 20682407 (+)
G584282 NA non-coding downstream 34758 20762187 ~ 20765068 (+)
G584288 NA non-coding downstream 39903 20767332 ~ 20767823 (+)
G584289 NA non-coding downstream 40593 20768022 ~ 20768303 (+)
G584293 NA non-coding downstream 45688 20773117 ~ 20774512 (+)
G584306 LOC106575249 non-coding downstream 64293 20791722 ~ 20791953 (+)
G583605 NA other upstream 487192 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 705262 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 1749990 18976678 ~ 18976999 (+)
G580997 NA other upstream 2234080 18492227 ~ 18492909 (+)
G580365 NA other upstream 2910141 17813342 ~ 17816848 (+)
G584643 NA other downstream 353399 21080828 ~ 21082615 (+)
G585573 NA other downstream 1225600 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1629154 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1959060 22684527 ~ 22722539 (+)
G586685 NA other downstream 2282632 23010061 ~ 23015120 (+)

Expression


Co-expression Network