G584323


Basic Information

Item Value
gene id G584323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 20821799 ~ 20854705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666502
gtctattggtaaatagcccacccattttcacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccaatatctctacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcatgccttttgcacacattgtatatagactccccctttgtgttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgctcatactgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaacgatcctacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666502 True 336 lncRNA 0.39 2 20821799 20854705

Neighbor

gene id symbol gene type direction distance location
LOC110527464 LOC106575252 coding upstream 163455 20634135 ~ 20658344 (+)
LOC110527460 LOC106575256 coding upstream 282136 20527428 ~ 20539663 (+)
LOC110527457 NA coding upstream 505912 20301287 ~ 20315887 (+)
LOC118965349 NA coding upstream 658904 20162080 ~ 20162895 (+)
LOC110527453 en1 coding upstream 723736 20093794 ~ 20098063 (+)
LOC110527471 LOC106574225 coding downstream 6099 20860804 ~ 20868580 (+)
LOC110527474 LOC106575156 coding downstream 14758 20869463 ~ 20873915 (+)
LOC110528809 LOC106575158 coding downstream 19547 20874252 ~ 20893679 (+)
LOC110527473 LOC106575157 coding downstream 39103 20893808 ~ 20941725 (+)
LOC110527479 LOC106575163 coding downstream 179165 21033870 ~ 21044932 (+)
G584320 NA non-coding upstream 6657 20814926 ~ 20815142 (+)
G584313 NA non-coding upstream 18323 20803217 ~ 20803476 (+)
G584306 LOC106575249 non-coding upstream 29846 20791722 ~ 20791953 (+)
G584293 NA non-coding upstream 47287 20773117 ~ 20774512 (+)
G584289 NA non-coding upstream 53496 20768022 ~ 20768303 (+)
G584616 NA non-coding downstream 176754 21031459 ~ 21031684 (+)
G584617 NA non-coding downstream 178637 21033342 ~ 21033590 (+)
G584644 NA non-coding downstream 228807 21083512 ~ 21083810 (+)
G584645 NA non-coding downstream 229756 21084461 ~ 21085015 (+)
G584671 NA non-coding downstream 273199 21127904 ~ 21128197 (+)
G583605 NA other upstream 582002 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 800072 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 1844800 18976678 ~ 18976999 (+)
G580997 NA other upstream 2328890 18492227 ~ 18492909 (+)
G580365 NA other upstream 3004951 17813342 ~ 17816848 (+)
G584643 NA other downstream 226123 21080828 ~ 21082615 (+)
G585573 NA other downstream 1098324 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1501878 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1831784 22684527 ~ 22722539 (+)
G586685 NA other downstream 2155356 23010061 ~ 23015120 (+)

Expression


Co-expression Network