Gene
RNA
| Item | Value |
|---|---|
| gene id | G584542 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 20874310 ~ 20874570 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: plakophilin-4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU666763 | True | 261 | lncRNA | 0.45 | 1 | 20874310 | 20874570 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527470 | LOC103366558 | coding | downstream | 34911 | 20838415 ~ 20839399 (-) |
| LOC110527469 | LOC106574449 | coding | downstream | 36955 | 20780524 ~ 20837355 (-) |
| otos2 | LOC106575250 | coding | downstream | 96257 | 20772867 ~ 20778065 (-) |
| LOC110527467 | LOC106574445 | coding | downstream | 109200 | 20759004 ~ 20765110 (-) |
| LOC110527466 | LOC106574444 | coding | downstream | 197362 | 20654190 ~ 20676948 (-) |
| trnat-ugu-34 | NA | coding | upstream | 56538 | 20931108 ~ 20931180 (-) |
| LOC110527476 | NA | coding | upstream | 68367 | 20942923 ~ 20949096 (-) |
| LOC110527478 | LOC106574231 | coding | upstream | 77407 | 20951977 ~ 21021196 (-) |
| ly75 | ly75 | coding | upstream | 171650 | 21046220 ~ 21079993 (-) |
| LOC110528811 | LOC106575164 | coding | upstream | 206228 | 21080798 ~ 21110934 (-) |
| G584501 | NA | non-coding | downstream | 399 | 20871868 ~ 20873911 (-) |
| G584500 | NA | non-coding | downstream | 68368 | 20805733 ~ 20805942 (-) |
| G584490 | NA | non-coding | downstream | 81205 | 20792872 ~ 20793105 (-) |
| G584487 | NA | non-coding | downstream | 86600 | 20787415 ~ 20787710 (-) |
| G584555 | LOC106574229 | non-coding | upstream | 17952 | 20892522 ~ 20893678 (-) |
| G584618 | NA | non-coding | upstream | 158991 | 21033561 ~ 21033784 (-) |
| G584673 | LOC106574235 | non-coding | upstream | 163736 | 21038306 ~ 21039785 (-) |
| G583661 | NA | other | downstream | 624325 | 20215649 ~ 20249985 (-) |
| G581174 | LOC101077481 | other | downstream | 2639272 | 18217158 ~ 18235038 (-) |
| G581089 | LOC106575297 | other | downstream | 2830930 | 18042927 ~ 18043380 (-) |
| G585240 | LOC106575179 | other | upstream | 546884 | 21421454 ~ 21424585 (-) |
| LOC110527499 | LOC106575189 | other | upstream | 642825 | 21513832 ~ 21583054 (-) |
| LOC110527506 | LOC106575199 | other | upstream | 1218242 | 22089741 ~ 22163995 (-) |
| G586414 | LOC106574278 | other | upstream | 1588638 | 22463208 ~ 22470518 (-) |
| LOC110527522 | LOC106575212 | other | upstream | 1735591 | 22609884 ~ 22620248 (-) |
