G584616


Basic Information

Item Value
gene id G584616
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21031459 ~ 21031684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666862
AATTGCACCATATTGTACAAAGGATGCATAACGTATAAatgcaaatgaataaaaaaaagtaCTGTATTGACCTTGTGGTTTATTTTTTCCTTGACTTCTTTTCATTAGAAGGTCTACAAGACCTTTTATGTCAATTATTCAAATACAGCTCATTAGAGCTGTTGGCAAAGGCATTAATTACCTTGGTGACAAAACAAACATGCCTGTAACATCCAAATAATAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666862 True 226 lncRNA 0.32 1 21031459 21031684

Neighbor

gene id symbol gene type direction distance location
LOC110527473 LOC106575157 coding upstream 89734 20893808 ~ 20941725 (+)
LOC110528809 LOC106575158 coding upstream 137780 20874252 ~ 20893679 (+)
LOC110527474 LOC106575156 coding upstream 157544 20869463 ~ 20873915 (+)
LOC110527471 LOC106574225 coding upstream 162879 20860804 ~ 20868580 (+)
LOC110527464 LOC106575252 coding upstream 373115 20634135 ~ 20658344 (+)
LOC110527479 LOC106575163 coding downstream 2186 21033870 ~ 21044932 (+)
LOC110527484 LOC106574241 coding downstream 145299 21176983 ~ 21183344 (+)
sumo1 sumo1 coding downstream 214674 21246358 ~ 21249349 (+)
LOC110527488 LOC106575173 coding downstream 283322 21315006 ~ 21337432 (+)
LOC110527489 LOC106575175 coding downstream 308008 21339692 ~ 21354616 (+)
G584323 NA non-coding upstream 176754 20821799 ~ 20854705 (+)
G584335 NA non-coding upstream 193881 20836435 ~ 20837578 (+)
G584320 NA non-coding upstream 216317 20814926 ~ 20815142 (+)
G584313 NA non-coding upstream 227983 20803217 ~ 20803476 (+)
G584306 LOC106575249 non-coding upstream 239506 20791722 ~ 20791953 (+)
G584617 NA non-coding downstream 1658 21033342 ~ 21033590 (+)
G584644 NA non-coding downstream 51828 21083512 ~ 21083810 (+)
G584645 NA non-coding downstream 52777 21084461 ~ 21085015 (+)
G584671 NA non-coding downstream 96220 21127904 ~ 21128197 (+)
G584711 NA non-coding downstream 99226 21130910 ~ 21131228 (+)
G583605 NA other upstream 791662 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1009732 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2054460 18976678 ~ 18976999 (+)
G580997 NA other upstream 2538550 18492227 ~ 18492909 (+)
G580365 NA other upstream 3214611 17813342 ~ 17816848 (+)
G584643 NA other downstream 49144 21080828 ~ 21082615 (+)
G585573 NA other downstream 921345 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1324899 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1654805 22684527 ~ 22722539 (+)
G586685 NA other downstream 1978377 23010061 ~ 23015120 (+)

Expression


Co-expression Network