G584643


Basic Information

Item Value
gene id G584643
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21080828 ~ 21082615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666895
AGGCACAGAGCATTTGTTATGAACATTATCAACAAAAAAGAACAAGAGACAGTAAACATGTTCAAGCATCCGTGATATCCTCTTGCATGTATTTCTTTCCACACAACAGAAAACCCATACGTCAACATATTTCGTATCTAATAACTCTGTGTACCcaatatacaaaaacaacaacaggtaacACAGCAAAGGCTGTACCGCATAACAAACAACCCACACATGAGTCTACTTAGAATACGGGATTATTTCTCAAAGAGCTACCATTTACATAACAGTACTTTGCTACATCGTTTTTGTTTCATCTTTTGTTCATTGGTTTCATTCTGTACTCCTACATTTTGACAGACGTGTGGACCAAATGAACAAAATGGAAGTGAATGTCAAAAATATTGTTCTCGTAATgataaataataaaacataaataaatgcctgcattttctctttattttttcttCACTTCCTCTTATGATGATCATGCATGTACTTATAAACTACTTTAAAAAATACTGTGAGGGCgtgagtgtgtgttctgtgtgtaggaAAATACGCAATAAACAACGACAACAAAAATTAAAAACTAAAACATAATCTTTCCTGTGTTGCATTGATGGAGTTTGGTGCAATAAAGTGGTAACAAAGAAACCCTGTACTTTAATGACAAGTTAGGTTTCAAAAAAATAACTTGGAATTGATTTGGGGTCTTATTTCTGTTCATGAATAAAATACATAGAAGATGACTACAGAATGTATTGCAAAAAGCATGACTTTGTCTTTGCTGTAAAGAACAACTGAATCACGGCCATTGTTATCTTAAACAAAGAAGAAAATTGTTTTGGTCCTGTACAAGGCATTACAGAAAACTAAGTCTTCACTGTGGGAAAGACTTGTACTCACATATATAGTGGGTACCAGCATTAGTGGGAGCAGTTGGCATTGTACCATAATAACAAAACAACCTTGCAGTGCAAAGAATATCGATCTATTTTCAAATGCCTACATTAGAATGCCAAAGTACTTGGGATAACAGCTCTAGTCCTCTTTAAGACGAAACTTACATCACACGAAGATGCACTCCCTCACTCTCAGCCACACGATTGGTCCCTGATTCATCAACTACTTGTAtaaagcacaggaggttggtggcaccttaactggggagaacgggctcgtggtaatgactgtagttgaatggtatcaaaaacatcaaacacatggtttccacgtgcctgatgccattccatttgctctgttccagctattattatgagccgtcctcccctcagcagcctcctgtggattCAAGTGGATAAAGCTAATTGGGCTCTGACATCCTGCTCTAAGTTCCCTTGCTGTGGTCCATGTCAGACCCACACAGAGGCATACCATTCTTCACAGTCATACAGAGTTCGGCCCATTCCCATGCTTTACCCAACTTTAGAGAACACCACCATTTTGCTGTCTCCAATAAGTCCTATAGCGCATCTGGAAaaggcaccgtattccctacatagtgcactacttttgaccaaagcagTGCACCTAATAGGGGAAagagtgccattttggacacacacCCTATTCTCCAGAGTGAGCTTCCAGATCTGCGATGAGAACGTTTCCATCGAAGTCTGTGGCCTGGGAACTAGTATGTCTGTAGTACGCGTTTCCCAGGGACGGCAGTCTGTGGAAGTGCGTCCTGTTCCTCTTGTAGACGAGCCAGAGCACCGCCACCAGCACGGCGAAGATCAGCATGGCCACCAGGACCGCGGCTGGGACGAAACTGTGGTG

Function

NR:

description
LOW QUALITY PROTEIN: secretory phospholipase A2 receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666895 True 1788 TUCP 0.41 1 21080828 21082615

Neighbor

gene id symbol gene type direction distance location
LOC110527479 LOC106575163 coding upstream 35896 21033870 ~ 21044932 (+)
LOC110527473 LOC106575157 coding upstream 139103 20893808 ~ 20941725 (+)
LOC110528809 LOC106575158 coding upstream 187149 20874252 ~ 20893679 (+)
LOC110527474 LOC106575156 coding upstream 206913 20869463 ~ 20873915 (+)
LOC110527471 LOC106574225 coding upstream 212248 20860804 ~ 20868580 (+)
LOC110527484 LOC106574241 coding downstream 94368 21176983 ~ 21183344 (+)
sumo1 sumo1 coding downstream 163743 21246358 ~ 21249349 (+)
LOC110527488 LOC106575173 coding downstream 232391 21315006 ~ 21337432 (+)
LOC110527489 LOC106575175 coding downstream 257077 21339692 ~ 21354616 (+)
LOC110527490 LOC106575177 coding downstream 272521 21355136 ~ 21364322 (+)
G584617 NA non-coding upstream 47238 21033342 ~ 21033590 (+)
G584616 NA non-coding upstream 49144 21031459 ~ 21031684 (+)
G584323 NA non-coding upstream 226123 20821799 ~ 20854705 (+)
G584335 NA non-coding upstream 243250 20836435 ~ 20837578 (+)
G584320 NA non-coding upstream 265686 20814926 ~ 20815142 (+)
G584644 NA non-coding downstream 897 21083512 ~ 21083810 (+)
G584645 NA non-coding downstream 1846 21084461 ~ 21085015 (+)
G584671 NA non-coding downstream 45289 21127904 ~ 21128197 (+)
G584711 NA non-coding downstream 48295 21130910 ~ 21131228 (+)
G584714 NA non-coding downstream 50044 21132659 ~ 21137506 (+)
G583605 NA other upstream 841031 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1059101 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2103829 18976678 ~ 18976999 (+)
G580997 NA other upstream 2587919 18492227 ~ 18492909 (+)
G580365 NA other upstream 3263980 17813342 ~ 17816848 (+)
G585573 NA other downstream 870414 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1273968 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1603874 22684527 ~ 22722539 (+)
G586685 NA other downstream 1927446 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2528737 23609520 ~ 23621369 (+)

Expression


Co-expression Network