Gene
RNA
| Item | Value |
|---|---|
| gene id | G584644 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 21083512 ~ 21083810 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: secretory phospholipase A2 receptor-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU666896 | True | 299 | lncRNA | 0.47 | 1 | 21083512 | 21083810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527479 | LOC106575163 | coding | upstream | 38580 | 21033870 ~ 21044932 (+) |
| LOC110527473 | LOC106575157 | coding | upstream | 141787 | 20893808 ~ 20941725 (+) |
| LOC110528809 | LOC106575158 | coding | upstream | 189833 | 20874252 ~ 20893679 (+) |
| LOC110527474 | LOC106575156 | coding | upstream | 209597 | 20869463 ~ 20873915 (+) |
| LOC110527471 | LOC106574225 | coding | upstream | 214932 | 20860804 ~ 20868580 (+) |
| LOC110527484 | LOC106574241 | coding | downstream | 93173 | 21176983 ~ 21183344 (+) |
| sumo1 | sumo1 | coding | downstream | 162548 | 21246358 ~ 21249349 (+) |
| LOC110527488 | LOC106575173 | coding | downstream | 231196 | 21315006 ~ 21337432 (+) |
| LOC110527489 | LOC106575175 | coding | downstream | 255882 | 21339692 ~ 21354616 (+) |
| LOC110527490 | LOC106575177 | coding | downstream | 271326 | 21355136 ~ 21364322 (+) |
| G584617 | NA | non-coding | upstream | 49922 | 21033342 ~ 21033590 (+) |
| G584616 | NA | non-coding | upstream | 51828 | 21031459 ~ 21031684 (+) |
| G584323 | NA | non-coding | upstream | 228807 | 20821799 ~ 20854705 (+) |
| G584335 | NA | non-coding | upstream | 245934 | 20836435 ~ 20837578 (+) |
| G584320 | NA | non-coding | upstream | 268370 | 20814926 ~ 20815142 (+) |
| G584645 | NA | non-coding | downstream | 651 | 21084461 ~ 21085015 (+) |
| G584671 | NA | non-coding | downstream | 44094 | 21127904 ~ 21128197 (+) |
| G584711 | NA | non-coding | downstream | 47100 | 21130910 ~ 21131228 (+) |
| G584714 | NA | non-coding | downstream | 48849 | 21132659 ~ 21137506 (+) |
| G584792 | NA | non-coding | downstream | 160164 | 21243974 ~ 21244173 (+) |
| G584643 | NA | other | upstream | 897 | 21080828 ~ 21082615 (+) |
| G583605 | NA | other | upstream | 843715 | 20238911 ~ 20239797 (+) |
| LOC110528807 | LOC106574429 | other | upstream | 1061785 | 20017855 ~ 20028775 (+) |
| G581976 | LOC106581475 | other | upstream | 2106513 | 18976678 ~ 18976999 (+) |
| G580997 | NA | other | upstream | 2590603 | 18492227 ~ 18492909 (+) |
| G585573 | NA | other | downstream | 869219 | 21953029 ~ 21953269 (+) |
| c7h10orf53 | cssa17h10orf53 | other | downstream | 1272773 | 22356500 ~ 22360232 (+) |
| LOC110527523 | stat1-2 | other | downstream | 1602679 | 22684527 ~ 22722539 (+) |
| G586685 | NA | other | downstream | 1926251 | 23010061 ~ 23015120 (+) |
| LOC110527540 | LOC106533352 | other | downstream | 2527542 | 23609520 ~ 23621369 (+) |
