G584645


Basic Information

Item Value
gene id G584645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21084461 ~ 21085015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666897
GGTGGGACACGGCACAGGGCTCCCTGGAGCGGCATCTCACAGCCGGCCCTCCTCCAGCCCCCGGTGACGTCCATGTACACACAGTCCCCCAGGATGAAATCATCATCATCGGCCGCAACCCAGTGAGTGAAGACCGTGTCACTGCCATCAGACCACTGGTAGTTGATCCCATCCTGTAGGGACGTACAGTCACAGGCAGGGAGGAGCTGACACACACTCTCAGGGTGAGCCTACGTTGCTAAGGCAGGTTGCTTTCAGTCTTGTAGGTCACGTCATGCAACGGGGCAGAAAGAGTAGTGGGCAGCAGGCAATGTTAAAAGGTTCGGCTTGGGGGAAGTGTGGTGTTTATAGACCAATGTGTCTGGCATTGTGTAGAGCGCTGTGAATCaattctctcctttcctttcctcattCCATATTTCACGAGTAAGACATTCCCTGAGTCTATGGGATTCTTGGATACACATGTTGTGCGTGGCTTAGAATTCCTCCCAGCCGGCCTGGCGGTTGAGAAAAATGACTCCCATACTGTGTTGAGTGAAGCACAAAAattgt

Function

NR:

description
LOW QUALITY PROTEIN: secretory phospholipase A2 receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666897 True 555 lncRNA 0.53 1 21084461 21085015

Neighbor

gene id symbol gene type direction distance location
LOC110527479 LOC106575163 coding upstream 39529 21033870 ~ 21044932 (+)
LOC110527473 LOC106575157 coding upstream 142736 20893808 ~ 20941725 (+)
LOC110528809 LOC106575158 coding upstream 190782 20874252 ~ 20893679 (+)
LOC110527474 LOC106575156 coding upstream 210546 20869463 ~ 20873915 (+)
LOC110527471 LOC106574225 coding upstream 215881 20860804 ~ 20868580 (+)
LOC110527484 LOC106574241 coding downstream 91968 21176983 ~ 21183344 (+)
sumo1 sumo1 coding downstream 161343 21246358 ~ 21249349 (+)
LOC110527488 LOC106575173 coding downstream 229991 21315006 ~ 21337432 (+)
LOC110527489 LOC106575175 coding downstream 254677 21339692 ~ 21354616 (+)
LOC110527490 LOC106575177 coding downstream 270121 21355136 ~ 21364322 (+)
G584644 NA non-coding upstream 651 21083512 ~ 21083810 (+)
G584617 NA non-coding upstream 50871 21033342 ~ 21033590 (+)
G584616 NA non-coding upstream 52777 21031459 ~ 21031684 (+)
G584323 NA non-coding upstream 229756 20821799 ~ 20854705 (+)
G584335 NA non-coding upstream 246883 20836435 ~ 20837578 (+)
G584671 NA non-coding downstream 42889 21127904 ~ 21128197 (+)
G584711 NA non-coding downstream 45895 21130910 ~ 21131228 (+)
G584714 NA non-coding downstream 47644 21132659 ~ 21137506 (+)
G584792 NA non-coding downstream 158959 21243974 ~ 21244173 (+)
G584795 LOC106575172 non-coding downstream 166259 21251274 ~ 21254524 (+)
G584643 NA other upstream 1846 21080828 ~ 21082615 (+)
G583605 NA other upstream 844664 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1062734 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2107462 18976678 ~ 18976999 (+)
G580997 NA other upstream 2591552 18492227 ~ 18492909 (+)
G585573 NA other downstream 868014 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1271568 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1601474 22684527 ~ 22722539 (+)
G586685 NA other downstream 1925046 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2526337 23609520 ~ 23621369 (+)

Expression


Co-expression Network