G584711


Basic Information

Item Value
gene id G584711
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21130910 ~ 21131228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU666966
atatacatcacTGGTTAGCAAGTACATTGATACATTAAGTTCTTATCAAGACAGTACTAACGATGACAAAGTGGACATCTACACTGCATCGACTTTCAGGGTGGCAggtcacctagtggttagagcattgggccagtaaccgaaaggttgctggatcaaatcccagagctgacaaggtaaaaatctgtcattctacccctgaacaaggcagttattcCACTGTTCCCCAgtcggctgtcattgtaaataagaatttggtcttaactgacttgcctagttaaacaaataCTTACTCATTTGAATGCATAGCCCCCTCTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU666966 True 319 lncRNA 0.42 1 21130910 21131228

Neighbor

gene id symbol gene type direction distance location
LOC110527479 LOC106575163 coding upstream 85978 21033870 ~ 21044932 (+)
LOC110527473 LOC106575157 coding upstream 189185 20893808 ~ 20941725 (+)
LOC110528809 LOC106575158 coding upstream 237231 20874252 ~ 20893679 (+)
LOC110527474 LOC106575156 coding upstream 256995 20869463 ~ 20873915 (+)
LOC110527471 LOC106574225 coding upstream 262330 20860804 ~ 20868580 (+)
LOC110527484 LOC106574241 coding downstream 45755 21176983 ~ 21183344 (+)
sumo1 sumo1 coding downstream 115130 21246358 ~ 21249349 (+)
LOC110527488 LOC106575173 coding downstream 183778 21315006 ~ 21337432 (+)
LOC110527489 LOC106575175 coding downstream 208464 21339692 ~ 21354616 (+)
LOC110527490 LOC106575177 coding downstream 223908 21355136 ~ 21364322 (+)
G584671 NA non-coding upstream 2713 21127904 ~ 21128197 (+)
G584645 NA non-coding upstream 45895 21084461 ~ 21085015 (+)
G584644 NA non-coding upstream 47100 21083512 ~ 21083810 (+)
G584617 NA non-coding upstream 97320 21033342 ~ 21033590 (+)
G584616 NA non-coding upstream 99226 21031459 ~ 21031684 (+)
G584714 NA non-coding downstream 1431 21132659 ~ 21137506 (+)
G584792 NA non-coding downstream 112746 21243974 ~ 21244173 (+)
G584795 LOC106575172 non-coding downstream 120046 21251274 ~ 21254524 (+)
G584830 NA non-coding downstream 136616 21267844 ~ 21268087 (+)
G584808 NA non-coding downstream 258067 21389295 ~ 21392225 (+)
G584643 NA other upstream 48295 21080828 ~ 21082615 (+)
G583605 NA other upstream 891113 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1109183 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2153911 18976678 ~ 18976999 (+)
G580997 NA other upstream 2638001 18492227 ~ 18492909 (+)
G585573 NA other downstream 821801 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1225355 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1555261 22684527 ~ 22722539 (+)
G586685 NA other downstream 1878833 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2480124 23609520 ~ 23621369 (+)

Expression


Co-expression Network