G585106


Basic Information

Item Value
gene id G585106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21132657 ~ 21195160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667414
ggaatgagagagtgtGAGATGGGAGCTGAGAAACAGACTGTCATCTGTAGTGACACATTTGTTTGTATTGAGAAGAACATTGCGATGACTAAATAGGTTAGTGCAATCTGCTAATGGAGTAATGGaggcagccacacacacaaccctcacacacacacacattctcacacaccaAGGTACATACTGTCCTTAAACATATATCAAAGGTCTCTGTGGAGCCGTAGGAGGATGAGTATTATATTATGTGAGCgtaccaaatggcactctattccctatttagtgcactgggctcaggtcaaaagtagtgcagtatatagggaatagagtgccatttgggatgcaaccgaTGTCTtgctgattttgtgtgtgtgtggagactgGAGCGGGTCCAGTTCCTATATGGTGGGTTGTGGggatacttcgggattttggcaatgatgccctttatctactagcatgctagcagatacccatagacttccagtcattgcgctaacactagtcagcattggcttgcaaaactacctctaacttcattgatactggacacagagacataaaaatggtatccacaaattCATTTGACTCTggagaagtagataaagggcctcattgccaaaatcccgaagtatccctttaacccattggaagtcccacccagttgactacttcaaaatggtgaaagtcctcaatggtgctgccAATGCTAAAATGGGCTTTTGGGCACTCGAGTCCtctatgtatctctatgggtcaaAAGCATTGCACCATAAAGAAAATAAGGTCCGATTTGGGACGCATCCAAAGCCAAGCTCAGGAGCTGGCCAATAGCAATTTTTACTATTCTTCCTCCTACTACTCTGTCCTCAAGTAAAGAAACATTCTGTTTTGTTTAGTATAGTATCATGCTGAATCTtgttttttgttgtgtttttccGATATGAACATTGCTACTGGTGGAATGCGGTTTTTAGCTCCGCCTTAGTTTTGGAGTCTCcaaagttaaaaaaaaacaaacaacgtGCTGCTTGTCGATCAGAGGTTCCAATAGGCTGGGGAATGAGGCGGgggttttttattttataaaagaGGAACACGCAAACCCACCAGGTGGTAGTGTAGGCGGCTAGTCTTGATCTATTCTTcccttgaaacacacacacacaccttctcagtATGGGACTTTGTGTTGGCAGTTcatgtggtgaggggggggggggggggggggggggggttgtagaaGTCTGAAAGATGGAAGTTTAAATTGCAACCATACTATTTGTAGTCTTGCATAGCTAGCGATGTCTGAACCAAGTGCAATTCTGTGTCTGGATCAATAGGCTAGTTGTACAGCAAATTCAACCAACACTTGTGTGATATAGACTGGCTGATGacaataaataaaatgaaatagtAGTAATTTATGCAGAaagatagattttttttttgtttgttttacatgTCTGGGTGATGATGCTGCTGGGTATCATCAGTTAGAAAAATAAAatcattttgtatttttgtttcctTATGTATGTTACAGCCATTGTTTCACTAGATTGGTAGAACAATCTTATCCTTGTGCTTTcctttataaaaacatttgaatAAAAACCCACCATGAATCAGCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU667414 True 1631 lncRNA 0.42 2 21132657 21195160

Neighbor

gene id symbol gene type direction distance location
LOC110528812 LOC106575165 coding downstream 4137 21111060 ~ 21128520 (-)
LOC110528811 LOC106575164 coding downstream 21723 21080798 ~ 21110934 (-)
ly75 ly75 coding downstream 52664 21046220 ~ 21079993 (-)
LOC110527478 LOC106574231 coding downstream 111461 20951977 ~ 21021196 (-)
LOC110527476 NA coding downstream 185398 20942923 ~ 20949096 (-)
LOC110527483 LOC106575170 coding upstream 11271 21206431 ~ 21223145 (-)
LOC110527482 LOC106575171 coding upstream 29392 21224552 ~ 21243191 (-)
LOC110527486 LOC106575172 coding upstream 56109 21251269 ~ 21254666 (-)
cdk15 LOC106575174 coding upstream 92670 21287830 ~ 21315121 (-)
LOC110527494 LOC106575184 coding upstream 194127 21389287 ~ 21403927 (-)
G585116 NA non-coding downstream 998 21131460 ~ 21131659 (-)
G584709 NA non-coding downstream 4864 21127559 ~ 21127793 (-)
G584673 LOC106574235 non-coding downstream 92872 21038306 ~ 21039785 (-)
G584618 NA non-coding downstream 98873 21033561 ~ 21033784 (-)
G585162 NA non-coding upstream 50431 21245591 ~ 21245934 (-)
G585167 NA non-coding upstream 64687 21259847 ~ 21260149 (-)
G585172 NA non-coding upstream 72941 21268101 ~ 21268314 (-)
G585180 NA non-coding upstream 84082 21279242 ~ 21279478 (-)
G585211 NA non-coding upstream 156971 21352131 ~ 21352574 (-)
LOC110527470 LOC103366558 other downstream 293321 20838415 ~ 20839399 (-)
otos2 LOC106575250 other downstream 354592 20772867 ~ 20778065 (-)
G583661 NA other downstream 882672 20215649 ~ 20249985 (-)
G581174 LOC101077481 other downstream 2897619 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 3089277 18042927 ~ 18043380 (-)
G585240 LOC106575179 other upstream 226294 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 322235 21513832 ~ 21583054 (-)
LOC110527506 LOC106575199 other upstream 897652 22089741 ~ 22163995 (-)
G586414 LOC106574278 other upstream 1268048 22463208 ~ 22470518 (-)
LOC110527522 LOC106575212 other upstream 1415001 22609884 ~ 22620248 (-)

Expression


Co-expression Network