G584830


Basic Information

Item Value
gene id G584830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21267844 ~ 21268087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667118
ccctgtttctttgtgttctggaatgtagccctgtctttcatttttgtttattGATTTAATCTGCGTTcgtttctcacctggtctcatcagctccctttttagttcagttctttctgtttgtatggttgtaaggtattgtttgtttttgactgcctacctatgtttgaccattgcctgcccgcgaccacgattcctgccttctgtgaAGGCTTAATAAACATCTGCCGCGCTCTGCTCTGGAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667118 True 244 lncRNA 0.43 1 21267844 21268087

Neighbor

gene id symbol gene type direction distance location
sumo1 sumo1 coding upstream 18495 21246358 ~ 21249349 (+)
LOC110527484 LOC106574241 coding upstream 84500 21176983 ~ 21183344 (+)
LOC110527479 LOC106575163 coding upstream 222912 21033870 ~ 21044932 (+)
LOC110527473 LOC106575157 coding upstream 326119 20893808 ~ 20941725 (+)
LOC110528809 LOC106575158 coding upstream 374165 20874252 ~ 20893679 (+)
LOC110527488 LOC106575173 coding downstream 46919 21315006 ~ 21337432 (+)
LOC110527489 LOC106575175 coding downstream 71605 21339692 ~ 21354616 (+)
LOC110527490 LOC106575177 coding downstream 87049 21355136 ~ 21364322 (+)
LOC110527492 LOC106575178 coding downstream 100614 21368701 ~ 21374052 (+)
LOC110527491 LOC106574254 coding downstream 106115 21374202 ~ 21388754 (+)
G584795 LOC106575172 non-coding upstream 13320 21251274 ~ 21254524 (+)
G584792 NA non-coding upstream 23671 21243974 ~ 21244173 (+)
G584714 NA non-coding upstream 130338 21132659 ~ 21137506 (+)
G584711 NA non-coding upstream 136616 21130910 ~ 21131228 (+)
G584671 NA non-coding upstream 139647 21127904 ~ 21128197 (+)
G584808 NA non-coding downstream 121208 21389295 ~ 21392225 (+)
G584820 NA non-coding downstream 125796 21393883 ~ 21438876 (+)
G584881 LOC106575186 non-coding downstream 172263 21440350 ~ 21441601 (+)
G584919 NA non-coding downstream 263313 21531400 ~ 21531633 (+)
G584923 NA non-coding downstream 274037 21542124 ~ 21542360 (+)
G584643 NA other upstream 185229 21080828 ~ 21082615 (+)
G583605 NA other upstream 1028047 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1246117 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2290845 18976678 ~ 18976999 (+)
G580997 NA other upstream 2774935 18492227 ~ 18492909 (+)
G585573 NA other downstream 684942 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 1088496 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1418402 22684527 ~ 22722539 (+)
G586685 NA other downstream 1741974 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2343265 23609520 ~ 23621369 (+)

Expression


Co-expression Network