G584808


Basic Information

Item Value
gene id G584808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21389295 ~ 21392225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667089
aTTAAGATTTATTGTGGTAATCTTCCTTTTTACAGACTATATACACAAGTTAGTTACCACATGGTCCGTTTTCAGACGGACCTGTGGTGTGAGATTCCTCTTGTTTCATCGCACTGTACTGGTGACAGCTGATACAAAAATCATTCATTTTCTATGCTAAAGTATGCATACTCTTATTGAGTTTATATTTCATCAATCTAGTTATATACCTTAACATTGTAATTAACTGACTTAAGTGTCTGTTTAAACACTTTCTTTAACATTAATAAACCCCCGAGTAAAGATAGAAAACAATTCCCACAAAACATAGAAAAGCTGAACACATCTTATTCTTTGAAGAGTTGACCCCAAATGAAATGGTATTTACTTCACACAAAGTGGAAAATTCATTAGTTTTACACCTTATACAACAGTATTGACTTGGAATCAACTGAACCACTCTTCCTCAAAACTACCAGCAGTACAGAAGAGTAAAGGATCTATGAGGGGTGAtacgggggagagagaagggttaaAAATCTCACTGTAGACAGTGAGTGAAACTATACATGGGTTGTCTGAAGTAgccagtcccctctcccttctaAGGCTCACAGATGATTGTCTCGACCACAAACTTGTTCTCAAAGTGACGGATCGTCCTGCAGTTCAGGGCTTCACGCTTTTCCCTGCCTACAAGGTAAAGATGAAGGAGGATGTATCAAAAATGTGCATGTAGGCCTATACAAACATCTTCTATAGCAAAATACAAAATGGTTAATACATGAAAATTCAGGGTAAATcttaaaaagtgtgtgtgtagtactaacccagtacggtgtgtgtgtgggtggcacTAACCcggtacggtgtgtgTGTGGGTGGCACTAACCCGGtacggtgtgtgtgggggtggcaCTAACCCGGTACGgtgtgtgtgtgtgggtggtactAACCcggtacggtgtgtgtgtgtgggggtggtaCTAACCCGGTATGGTGTGTGTGGCACTAACCCAGTATGGTGTGCGTGTGGCACTAacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtggcactaacccagtat
>TU667091
aTTAAGATTTATTGTGGTAATCTTCCTTTTTACAGACTATATACACAAGTTAGTTACCACATGGTCCGTTTTCAGACGGACCTGTGGTGTGAGATTCCTCTTGTTTCATCGCACTGTACTGGTGACAGCTGATACAAAAATCATTCATTTTCTATGCTAAAGTATGCATACTCTTATTGAGTTTATATTTCATCAATCTAGTTATATACCTTAACATTGTAATTAACTGACTTAAGTGTCTGTTTAAACACTTTCTTTAACATTAATAAACCCCCGAGTAAAGATAGAAAACAATTCCCACAAAACATAGAAAAGCTGAACACATCTTATTCTTTGAAGAGTTGACCCCAAATGAAATGGTATTTACTTCACACAAAGTGGAAAATTCATTAGTTTTACACCTTATACAACAGTATTGACTTGGAATCAACTGAACCACTCTTCCTCAAAACTACCAGCAGTACAGAAGAGTAAAGGATCTATGAGGGGTGAtacgggggagagagaagggttaaAAATCTCACTGTAGACAGTGAGTGAAACTATACATGGGTTGTCTGAAGTAgccagtcccctctcccttctaAGGCTCACAGATGATTGTCTCGACCACAAACTTGTTCTCAAAGTGACGGATCGTCCTGCAGTTCAGGGCTTCACGCTTTTCCCTGCCTACAAGGTAAAGATGAAGGAGGATGTATCAAAAATGTGCATGTAGGCCTATACAAACATCTTCTATAGCAAAATACAAAATGGTTAATACATGAAAATTCAGGGTAAATcttaaaaagtgtgtgtgtagtactaacccagtacggtgtgtgtgtgggtggcacTAACCcggtacggtgtgtgtgtgggtggcacTAACCCGGTACACTGTGGGTGGCACTAACCCGGtacggtgtgtgtgggggtggcaCTAACCCGGTACGgtgtgtgtgtgtgggtggtactAACCcggtacggtgtgtgtgtgtgggggtggtaCTAACCCGGTATGGTGTGTGTGGCACTAACCCAGTATGGTGTGCGTGTGGCACTAacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtggcactaacccagtatggtgtgtgtgtGCGTGTGTGTGGCACTAacccagtatggtgtgtgtgtgtggcactaacccagtatggtgtgtgtgtgtGTGTGGCACTAacccagtatggtgtgtgtgtgtgtgtgtggcactaacccagtatggtgtgtgtgagtgtgtggcactaacccagtatggtg

Function

NR:

description
integral membrane protein 2B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667089 False 1104 lncRNA 0.42 3 21389295 21390450
TU667091 True 1325 lncRNA 0.44 5 21389295 21392225

Neighbor

gene id symbol gene type direction distance location
LOC110527491 LOC106574254 coding upstream 541 21374202 ~ 21388754 (+)
LOC110527492 LOC106575178 coding upstream 15243 21368701 ~ 21374052 (+)
LOC110527490 LOC106575177 coding upstream 24973 21355136 ~ 21364322 (+)
LOC110527489 LOC106575175 coding upstream 34679 21339692 ~ 21354616 (+)
LOC110527488 LOC106575173 coding upstream 51863 21315006 ~ 21337432 (+)
LOC110528813 LOC106575179 coding downstream 12342 21404567 ~ 21433139 (+)
LOC110527493 LOC106574257 coding downstream 41687 21433912 ~ 21436335 (+)
LOC110527495 LOC106574258 coding downstream 50878 21443103 ~ 21452116 (+)
LOC110527497 LOC106575187 coding downstream 62522 21454747 ~ 21496011 (+)
LOC110527501 ralbb coding downstream 297111 21689336 ~ 21695194 (+)
G584830 NA non-coding upstream 121208 21267844 ~ 21268087 (+)
G584795 LOC106575172 non-coding upstream 134771 21251274 ~ 21254524 (+)
G584792 NA non-coding upstream 145122 21243974 ~ 21244173 (+)
G584714 NA non-coding upstream 251789 21132659 ~ 21137506 (+)
G584711 NA non-coding upstream 258067 21130910 ~ 21131228 (+)
G584820 NA non-coding downstream 1658 21393883 ~ 21438876 (+)
G584881 LOC106575186 non-coding downstream 48125 21440350 ~ 21441601 (+)
G584919 NA non-coding downstream 139175 21531400 ~ 21531633 (+)
G584923 NA non-coding downstream 149899 21542124 ~ 21542360 (+)
G584959 NA non-coding downstream 203221 21595446 ~ 21595685 (+)
G584643 NA other upstream 306680 21080828 ~ 21082615 (+)
G583605 NA other upstream 1149498 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1367568 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2412296 18976678 ~ 18976999 (+)
G580997 NA other upstream 2896386 18492227 ~ 18492909 (+)
G585573 NA other downstream 560804 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 964358 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1294264 22684527 ~ 22722539 (+)
G586685 NA other downstream 1617836 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2219127 23609520 ~ 23621369 (+)

Expression


Co-expression Network