G585306


Basic Information

Item Value
gene id G585306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21535004 ~ 21535506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667631
gtcgtgatttatttagaattcaaggtacacttaaccagcatggctaccacagcattctgcagcgatacaccatcccatctggtttgcgcttagtgggactatcatttgtttttcaacaggacaatgaccaaacacacctccaggctgtgtaagggctatttgaccaagaaggagagtgatgggagtactgcaacagatgacctggcatccacaatcacccaacctcaacccaatagagatggtttgggatgagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaagtccttcaagacggttggaaaaatATTCtaggtgaagcttgttgagagaatgcaaagagtgtacacagctgtcatcaaggcaaagggtgactactttgaagaatctaaaatctaaaatgtattttgatttgtttaacactttcttggttactacatgattccatttgtgttatttcatagttttgatgtctttact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667631 True 503 lncRNA 0.42 1 21535004 21535506

Neighbor

gene id symbol gene type direction distance location
LOC118965423 NA coding downstream 75979 21458900 ~ 21459025 (-)
LOC118965268 NA coding downstream 86201 21447707 ~ 21448803 (-)
LOC110527496 LOC106575186 coding downstream 93307 21439522 ~ 21441697 (-)
LOC110527494 LOC106575184 coding downstream 131077 21389287 ~ 21403927 (-)
cdk15 LOC106575174 coding downstream 219883 21287830 ~ 21315121 (-)
LOC110527500 LOC106575190 coding upstream 138457 21673963 ~ 21684695 (-)
LOC110528814 LOC106575192 coding upstream 162311 21697817 ~ 21736923 (-)
LOC118965269 pnpla4 coding upstream 293658 21829164 ~ 21831559 (-)
LOC110527506 LOC106575199 coding upstream 554235 22089741 ~ 22163995 (-)
pudp hdd1a coding upstream 678117 22213623 ~ 22230742 (-)
G585251 NA non-coding downstream 39274 21443883 ~ 21495730 (-)
G585254 LOC106574260 non-coding downstream 46505 21488002 ~ 21488499 (-)
G585211 NA non-coding downstream 182430 21352131 ~ 21352574 (-)
G585180 NA non-coding downstream 255526 21279242 ~ 21279478 (-)
G585172 NA non-coding downstream 266690 21268101 ~ 21268314 (-)
G585317 NA non-coding upstream 16989 21552495 ~ 21552708 (-)
G585332 NA non-coding upstream 35489 21570995 ~ 21571310 (-)
G585359 NA non-coding upstream 85629 21621135 ~ 21621932 (-)
G585367 ralbb non-coding upstream 153814 21689320 ~ 21696570 (-)
G585421 NA non-coding upstream 204408 21739914 ~ 21753114 (-)
LOC110527499 LOC106575189 other downstream 16131 21513832 ~ 21583054 (-)
G585240 LOC106575179 other downstream 110419 21421454 ~ 21424585 (-)
LOC110527470 LOC103366558 other downstream 695668 20838415 ~ 20839399 (-)
otos2 LOC106575250 other downstream 756939 20772867 ~ 20778065 (-)
G583661 NA other downstream 1285019 20215649 ~ 20249985 (-)
G586414 LOC106574278 other upstream 927702 22463208 ~ 22470518 (-)
LOC110527522 LOC106575212 other upstream 1074655 22609884 ~ 22620248 (-)
LOC110527529 ngl1 other upstream 1273147 22807676 ~ 22812906 (-)
G586878 NA other upstream 1548984 23084490 ~ 23087137 (-)

Expression


Co-expression Network