G584959


Basic Information

Item Value
gene id G584959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21595446 ~ 21595685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667252
CTGTATCCATGATTCATGATGTTATCCTCAGCCAGTGGTTTTACAATGCTCAATAAATCAAATTCATTTCTAAAGCACTTTTATCATCAGCAgatgtctcaaagtgctatacagaaaccccagcctaaaaccccaaacagcaagcaatgcagatgtagaagcacggtggctaggaaaaactccctagaaaggccggagcctaggaagaaacctagtgaGGAACCATGCATAGATAGATGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667252 True 240 lncRNA 0.42 1 21595446 21595685

Neighbor

gene id symbol gene type direction distance location
LOC110527497 LOC106575187 coding upstream 99435 21454747 ~ 21496011 (+)
LOC110527495 LOC106574258 coding upstream 143330 21443103 ~ 21452116 (+)
LOC110527493 LOC106574257 coding upstream 159111 21433912 ~ 21436335 (+)
LOC110528813 LOC106575179 coding upstream 162307 21404567 ~ 21433139 (+)
LOC110527491 LOC106574254 coding upstream 206692 21374202 ~ 21388754 (+)
LOC110527501 ralbb coding downstream 93651 21689336 ~ 21695194 (+)
LOC110527502 LOC106575193 coding downstream 142064 21737749 ~ 21744000 (+)
LOC100136615 LOC100136615 coding downstream 153655 21749340 ~ 21799872 (+)
LOC110527503 LOC106575196 coding downstream 166443 21762128 ~ 21790179 (+)
sts sts coding downstream 217302 21812987 ~ 21826025 (+)
G584923 NA non-coding upstream 53086 21542124 ~ 21542360 (+)
G584919 NA non-coding upstream 63813 21531400 ~ 21531633 (+)
G584881 LOC106575186 non-coding upstream 153845 21440350 ~ 21441601 (+)
G584820 NA non-coding upstream 156570 21393883 ~ 21438876 (+)
G584808 NA non-coding upstream 203221 21389295 ~ 21392225 (+)
G584960 NA non-coding downstream 539 21596224 ~ 21596434 (+)
G584962 NA non-coding downstream 6271 21601956 ~ 21602164 (+)
G584969 NA non-coding downstream 18611 21614296 ~ 21614602 (+)
G585003 NA non-coding downstream 84386 21680071 ~ 21721438 (+)
G584643 NA other upstream 512831 21080828 ~ 21082615 (+)
G583605 NA other upstream 1355649 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1573719 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2618447 18976678 ~ 18976999 (+)
G580997 NA other upstream 3102537 18492227 ~ 18492909 (+)
G585573 NA other downstream 357344 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 760898 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1090804 22684527 ~ 22722539 (+)
G586685 NA other downstream 1414376 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2015667 23609520 ~ 23621369 (+)

Expression


Co-expression Network