G584960


Basic Information

Item Value
gene id G584960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21596224 ~ 21596434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667253
GCAATAAACGCCTCGTTGTTTCATTTAGTCTTCATTTATTCAATTGCCATTCCCCCTGCATTCATTCAGAAaagccctcgctctctctctctctctctctctctttgatatCAATAAGCAGCTCTTCTGTTGGGCAGACACAGGACACAGAACTTGAACCGCGGGCCATTTGACAGAGGCTTGTTTTAGGGATGGGAAATTCGCTGGCGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667253 True 211 lncRNA 0.46 1 21596224 21596434

Neighbor

gene id symbol gene type direction distance location
LOC110527497 LOC106575187 coding upstream 100213 21454747 ~ 21496011 (+)
LOC110527495 LOC106574258 coding upstream 144108 21443103 ~ 21452116 (+)
LOC110527493 LOC106574257 coding upstream 159889 21433912 ~ 21436335 (+)
LOC110528813 LOC106575179 coding upstream 163085 21404567 ~ 21433139 (+)
LOC110527491 LOC106574254 coding upstream 207470 21374202 ~ 21388754 (+)
LOC110527501 ralbb coding downstream 92902 21689336 ~ 21695194 (+)
LOC110527502 LOC106575193 coding downstream 141315 21737749 ~ 21744000 (+)
LOC100136615 LOC100136615 coding downstream 152906 21749340 ~ 21799872 (+)
LOC110527503 LOC106575196 coding downstream 165694 21762128 ~ 21790179 (+)
sts sts coding downstream 216553 21812987 ~ 21826025 (+)
G584959 NA non-coding upstream 539 21595446 ~ 21595685 (+)
G584923 NA non-coding upstream 53864 21542124 ~ 21542360 (+)
G584919 NA non-coding upstream 64591 21531400 ~ 21531633 (+)
G584881 LOC106575186 non-coding upstream 154623 21440350 ~ 21441601 (+)
G584820 NA non-coding upstream 157348 21393883 ~ 21438876 (+)
G584962 NA non-coding downstream 5522 21601956 ~ 21602164 (+)
G584969 NA non-coding downstream 17862 21614296 ~ 21614602 (+)
G585003 NA non-coding downstream 83637 21680071 ~ 21721438 (+)
G585059 NA non-coding downstream 206173 21802607 ~ 21802851 (+)
G584643 NA other upstream 513609 21080828 ~ 21082615 (+)
G583605 NA other upstream 1356427 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1574497 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2619225 18976678 ~ 18976999 (+)
G580997 NA other upstream 3103315 18492227 ~ 18492909 (+)
G585573 NA other downstream 356595 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 760149 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 1090055 22684527 ~ 22722539 (+)
G586685 NA other downstream 1413627 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 2014918 23609520 ~ 23621369 (+)

Expression


Co-expression Network