G585614


Basic Information

Item Value
gene id G585614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21981396 ~ 21981719 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667989
taatcactgcgagccaggcctaatcacccaacatcagtgcccgacctcactaatgctcttgtggctgaatggaagcaagtccccgcagcaatgttccaacatctagtgtaaaGTCTTCCCAaaagattggaggctgttatagcagcataggggggaccaactccatattaattcccatgattttggaatgagaatgagatgagcaggtgtccacttaCTTTTGGCAATGTGTACCTAGACATACCTACTCTAGACAAACCTTGTAACTCTGATTCCCTCTGTAAGGTATtcattatatactgtatgtgttacatACATATTTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667989 True 324 lncRNA 0.43 1 21981396 21981719

Neighbor

gene id symbol gene type direction distance location
sts sts coding upstream 155371 21812987 ~ 21826025 (+)
LOC110527503 LOC106575196 coding upstream 191217 21762128 ~ 21790179 (+)
LOC100136615 LOC100136615 coding upstream 229871 21749340 ~ 21799872 (+)
LOC110527502 LOC106575193 coding upstream 237396 21737749 ~ 21744000 (+)
LOC110527501 ralbb coding upstream 286202 21689336 ~ 21695194 (+)
LOC110527508 LOC106574269 coding downstream 308796 22290515 ~ 22312038 (+)
mxra5a LOC106574270 coding downstream 345852 22327571 ~ 22347037 (+)
c7h10orf53 cssa17h10orf53 coding downstream 374781 22356500 ~ 22360232 (+)
LOC118936317 LOC106574274 coding downstream 404151 22385870 ~ 22416150 (+)
LOC110527515 LOC106575209 coding downstream 478591 22460310 ~ 22470522 (+)
G585600 NA non-coding upstream 12335 21968854 ~ 21969061 (+)
G585581 NA non-coding upstream 22142 21958996 ~ 21959254 (+)
G585577 NA non-coding upstream 25029 21956149 ~ 21956367 (+)
G585558 NA non-coding upstream 39225 21941931 ~ 21942171 (+)
G585555 NA non-coding upstream 40599 21940588 ~ 21940797 (+)
G585624 NA non-coding downstream 7687 21989406 ~ 21989608 (+)
G585633 NA non-coding downstream 13169 21994888 ~ 21995290 (+)
G585757 NA non-coding downstream 96323 22078042 ~ 22078247 (+)
G585818 NA non-coding downstream 181141 22162860 ~ 22186144 (+)
G585855 hdd1a non-coding downstream 245953 22227672 ~ 22230841 (+)
G585573 NA other upstream 28127 21953029 ~ 21953269 (+)
G584643 NA other upstream 898781 21080828 ~ 21082615 (+)
G583605 NA other upstream 1741599 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1959669 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 3004397 18976678 ~ 18976999 (+)
LOC110527523 stat1-2 other downstream 704770 22684527 ~ 22722539 (+)
G586685 NA other downstream 1028342 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 1629633 23609520 ~ 23621369 (+)
G587660 NA other downstream 1826003 23807722 ~ 23808000 (+)

Expression


Co-expression Network