G585624


Basic Information

Item Value
gene id G585624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21989406 ~ 21989608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU667999
ATAGATAAGTACACCATGCAGGTCTGGTCCTATAGGCAGCAGATATAAAATATAAAAGCTTTGAGTTAAGTGCTATATCGctagtgttgagagagagagaggggtttaatGAGACGCAGGATATAATTAGAGCCAATCAGTGTTTTGCAGATTGCAGAGAATTCCAACTATTAGCATAATTCAATAAAGCCATTCGATAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU667999 True 203 lncRNA 0.37 1 21989406 21989608

Neighbor

gene id symbol gene type direction distance location
sts sts coding upstream 163381 21812987 ~ 21826025 (+)
LOC110527503 LOC106575196 coding upstream 199227 21762128 ~ 21790179 (+)
LOC100136615 LOC100136615 coding upstream 237881 21749340 ~ 21799872 (+)
LOC110527502 LOC106575193 coding upstream 245406 21737749 ~ 21744000 (+)
LOC110527501 ralbb coding upstream 294212 21689336 ~ 21695194 (+)
LOC110527508 LOC106574269 coding downstream 300907 22290515 ~ 22312038 (+)
mxra5a LOC106574270 coding downstream 337963 22327571 ~ 22347037 (+)
c7h10orf53 cssa17h10orf53 coding downstream 366892 22356500 ~ 22360232 (+)
LOC118936317 LOC106574274 coding downstream 396262 22385870 ~ 22416150 (+)
LOC110527515 LOC106575209 coding downstream 470702 22460310 ~ 22470522 (+)
G585614 NA non-coding upstream 7687 21981396 ~ 21981719 (+)
G585600 NA non-coding upstream 20345 21968854 ~ 21969061 (+)
G585581 NA non-coding upstream 30152 21958996 ~ 21959254 (+)
G585577 NA non-coding upstream 33039 21956149 ~ 21956367 (+)
G585558 NA non-coding upstream 47235 21941931 ~ 21942171 (+)
G585633 NA non-coding downstream 5280 21994888 ~ 21995290 (+)
G585757 NA non-coding downstream 88434 22078042 ~ 22078247 (+)
G585818 NA non-coding downstream 173252 22162860 ~ 22186144 (+)
G585855 hdd1a non-coding downstream 238064 22227672 ~ 22230841 (+)
G586031 NA non-coding downstream 299439 22289047 ~ 22289335 (+)
G585573 NA other upstream 36137 21953029 ~ 21953269 (+)
G584643 NA other upstream 906791 21080828 ~ 21082615 (+)
G583605 NA other upstream 1749609 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1967679 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 3012407 18976678 ~ 18976999 (+)
LOC110527523 stat1-2 other downstream 696881 22684527 ~ 22722539 (+)
G586685 NA other downstream 1020453 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 1621744 23609520 ~ 23621369 (+)
G587660 NA other downstream 1818114 23807722 ~ 23808000 (+)

Expression


Co-expression Network