G585633


Basic Information

Item Value
gene id G585633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21994888 ~ 21995290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU668008
gaacaagttccacagacatgtgactaacagaaattgaatgatgtgtccctgaacaaaaggggggtcaaaatcaaaagtaaaagtcagtatctggtgtggccaccagcttcattaagtactgcagtgcatctcctcctcatggactgcaccagatttgccagttcttgctgtgcgctattaccccactcttctaccaaggcacctgcaagttcccggacatttctggggtgaatggctctatccctcaccctctgaaccaacaggtcccagacgtgctcaatgggattgagatccaggctcttcgctggccatggcagaacactgacattcctgtcttgcaggaaatcactcacagaacgagcagtatggctggtggcattgtcatgctggagggtcatggtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU668008 True 403 lncRNA 0.50 1 21994888 21995290

Neighbor

gene id symbol gene type direction distance location
sts sts coding upstream 168863 21812987 ~ 21826025 (+)
LOC110527503 LOC106575196 coding upstream 204709 21762128 ~ 21790179 (+)
LOC100136615 LOC100136615 coding upstream 243363 21749340 ~ 21799872 (+)
LOC110527502 LOC106575193 coding upstream 250888 21737749 ~ 21744000 (+)
LOC110527501 ralbb coding upstream 299694 21689336 ~ 21695194 (+)
LOC110527508 LOC106574269 coding downstream 295225 22290515 ~ 22312038 (+)
mxra5a LOC106574270 coding downstream 332281 22327571 ~ 22347037 (+)
c7h10orf53 cssa17h10orf53 coding downstream 361210 22356500 ~ 22360232 (+)
LOC118936317 LOC106574274 coding downstream 390580 22385870 ~ 22416150 (+)
LOC110527515 LOC106575209 coding downstream 465020 22460310 ~ 22470522 (+)
G585624 NA non-coding upstream 5280 21989406 ~ 21989608 (+)
G585614 NA non-coding upstream 13169 21981396 ~ 21981719 (+)
G585600 NA non-coding upstream 25827 21968854 ~ 21969061 (+)
G585581 NA non-coding upstream 35634 21958996 ~ 21959254 (+)
G585577 NA non-coding upstream 38521 21956149 ~ 21956367 (+)
G585757 NA non-coding downstream 82752 22078042 ~ 22078247 (+)
G585818 NA non-coding downstream 167570 22162860 ~ 22186144 (+)
G585855 hdd1a non-coding downstream 232382 22227672 ~ 22230841 (+)
G586031 NA non-coding downstream 293757 22289047 ~ 22289335 (+)
G585573 NA other upstream 41619 21953029 ~ 21953269 (+)
G584643 NA other upstream 912273 21080828 ~ 21082615 (+)
G583605 NA other upstream 1755091 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1973161 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 3017889 18976678 ~ 18976999 (+)
LOC110527523 stat1-2 other downstream 691199 22684527 ~ 22722539 (+)
G586685 NA other downstream 1014771 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 1616062 23609520 ~ 23621369 (+)
G587660 NA other downstream 1812432 23807722 ~ 23808000 (+)

Expression


Co-expression Network