XLOC_025238 (il12rb2l)


Basic Information

Item Value
gene id XLOC_025238
gene name il12rb2l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 19216567 ~ 19238394 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049845
GAAGGAACGATATCAGCGGGTATGGAAAGTGCTGTTTATAGCATGTAGAAAATAAAGCTAAAACTTTTAACGTTAAATAATTTGAGAAGATTACCGAAGAACCTCCGTGCTGCTTCTGATGGTCAGCGATGTCACTTCAGAAGGAAGCAAAGAATTGAATGCCCGCCCGTGGACATTCCGTAAACGAGTGAACCATTCGGTTAACGGGACGTTGCGTCATACTGGAGTTTTTACATAGGCTACGCGAATGCCGTGAGTGATGGCATGGCAGAATGCTAAGCTGCATTTTCTTTTACTACTGAACATGTGGATATGCTCTCAAGGCTTGTTCGCATTTGAAGTGGATGTAAACTGCTGGTGGAATCAAGCCCTTCCTGTGGATCGCGATGTGTCTGTTTTGTGCCATACAAGTGCACAGGGAAGAGCATACAAGTGTGATCTCTGCCAACTTCATGTTATCACGTCGGGGCACCAGTTAACCAGCACATGTGCCAACTCCACTGAAACCTTCAGCTTTTCTATTCCAGTAGAGCATAGAGAGCACATTAACTGCTCATGCAGTGGAAGTACCTGCAATGTGAAAGCACAAGGAGGCTATCCACCGTCTCCCCCATCCCACCCTAATTGTGTTATCGAAGACCTGGTTAAAGAAGATATTTATTGCTCCTGGACTATATCTGATGAGCCGATGATTACAACTGTGTACACTCTTCATTGGCAAGATTATGAAGGGAACGTAAATTCTGCAGAGAGTGATTGTGAAATGGCCATCATTAACCGTGACAAGTACACAAAAGGCACTCAGATGACAGTATGGGTCACTGCTAGAAACGTTTTGGGTTATGCGCGGTCTGAAGAATCTGTCTTCAACACAGGCCATATCAGGCGGCCAGACCCCCCATACAATATGACCCACATGTTTACACCACTGGAAATCTTCTGGGACATGGACTGTGACATTATGGGCACATTAGATGAGTGTCACGTGCAATACCACATGCAAAATCACATGCTAGACTGGACCGAGGTGGATGATTGCCAGAGCATGTTTCGAATAGAGGATCCACAGCCGTTCACTCAGTACAGTTTTCGCGTTCGCTGCCACTGTGGACATGAAGAGAAAGTCATGAGTAACTGGAGCTCAGTGTATTCAGTGCGCACGCCTCCTGCAGCTCCAGTTGGACAGCTGGATGTTTGGAGTGACTGCGCACCTAATTCTGACAAATCATCTTGTAACGTTTATTGGAAGGAAATGCCCCTGTCTCAGGCTCGAGGGGAAGTTACGAGTTATATTGTAACGCTGACGCTTAAAAATGGCACTGAGATTAAGCAGGTTGCGAGGCAGAAGAGAGACGCTGGAAACCAGCATCGCACTGAACACAGCTGCCCACAGCTCAGACACTTCCCTTTAAAACCCAGCGTTGTGGGGGTTTTTGTGTCTGCCAGCACCTCAATGGGCACATCCGACCCCACACTCATGCCATTTCCTGAGAGggAACAGTCTATACCTGAGGTGCATCTGAATGTAAGGAGTGAGAAGCAGGCTTTGTTGGCCTCATGGTCTGTTCAGCCGGAGTTATCTGAGCGCGTCCTGCAGTATGTAGTCCAGCACGTGTCTGTCGCACCTGACCGCCCGTGCCTGAACTGGCTGAGAGTAGACAGAACACAGAGCTCTGTCACACTCACAGGTGACTTTAAGGACTACATGGCGTATAATGTGTCACTCTTCGCCATCTTTAACAACCACAGCACTTTCCTCAATTCATCTATTGCATACACTCGTCAAAAAGTTCCTCCTAAAGTTTCAGTTATCCAAGTGACGGACATTTCTCACTCGTCTGTGACTCTGACATGGAGCCCCATCCCTGTGAATGAGAGCAATGGTGTCATCCTGCATTACTTAGTGGGCATCAACGAGACAGCTTTAATGTTTAACGTGAGCAGTGCCAGGACAAGTATACTTCTGTCAGACCTGCAGCCGTCCCGGCAGTATCAGGCCTGGGTGAGCGCAGTGAGCGAGGCCGGTGAAGGCCCGAGGAGATTCACCACCTTCTCTACCAGTGACAAAACCAATGTTGTTATATATGTGGTGCCCACACTGACAGTCATGGTGGTGATTGGCCTGATATTAGTGTTTATGTTACACATCATGGTAAATTTATTTCTGCTGTTTACCCGCAGGTTATCTTACTGTCACTGTTTTGAGAAGATTCCAGATCCAATAAACAGCAAATCATTTAAACACATGAACTTACAGGTGAGAATCTACTTTTTTGTGTTATAA

Function

symbol description
il12rb2l Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to be involved in cytokine-mediated signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane.

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0009897 external side of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043235 receptor complex cellular_component
GO:0004896 cytokine receptor activity molecular_function
GO:0019955 cytokine binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080107-6 Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to be involved in cytokine-mediated signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000074850

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049845 True 2284 mRNA 0.47 14 19216567 19238394

Neighbor

gene id symbol gene type direction distance location
XLOC_025237 rln3a coding upstream 5930 19207176 ~ 19210637 (+)
XLOC_025236 si:ch211-198m1.1 coding upstream 248914 18936006 ~ 18967653 (+)
XLOC_025232 tmem104 coding upstream 292652 18840810 ~ 18923915 (+)
XLOC_025239 smarca4a coding downstream 7410 19245804 ~ 19282525 (+)
XLOC_025240 ldlra coding downstream 60915 19299309 ~ 19323689 (+)
XLOC_025241 BX322663.3 coding downstream 74597 19312991 ~ 19313107 (+)
XLOC_025242 kri1 coding downstream 97892 19336286 ~ 19355200 (+)
XLOC_025243 BX322663.1 coding downstream 111325 19349719 ~ 19349817 (+)
XLOC_025429 BX649540.1 misc downstream 11010345 30248739 ~ 30249036 (+)
XLOC_025235 CU151886.1 non-coding upstream 298984 18917461 ~ 18917583 (+)
XLOC_025234 CU151886.2 non-coding upstream 323801 18892650 ~ 18892766 (+)
XLOC_025233 AL772362.1 non-coding upstream 348615 18867835 ~ 18867952 (+)
XLOC_025229 AL772362.2 non-coding upstream 428082 18771528 ~ 18788485 (+)
XLOC_025227 NA non-coding upstream 544276 18670824 ~ 18672291 (+)
XLOC_025248 NA non-coding downstream 234569 19472963 ~ 19473197 (+)
XLOC_025257 NA non-coding downstream 821284 20059678 ~ 20064732 (+)
XLOC_025259 NA non-coding downstream 959908 20198302 ~ 20198619 (+)

Expression


Co-expression Network