Gene
RNA
| Item | Value |
|---|---|
| gene id | G586313 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 22311366 ~ 22311538 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU668735 | True | 173 | lncRNA | 0.37 | 1 | 22311366 | 22311538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pudp | hdd1a | coding | downstream | 80624 | 22213623 ~ 22230742 (-) |
| LOC110527506 | LOC106575199 | coding | downstream | 147371 | 22089741 ~ 22163995 (-) |
| LOC118965269 | pnpla4 | coding | downstream | 479807 | 21829164 ~ 21831559 (-) |
| LOC110528814 | LOC106575192 | coding | downstream | 574443 | 21697817 ~ 21736923 (-) |
| LOC110527500 | LOC106575190 | coding | downstream | 626671 | 21673963 ~ 21684695 (-) |
| LOC110512351 | LOC106575201 | coding | upstream | 50623 | 22362161 ~ 22368437 (-) |
| cd99 | NA | coding | upstream | 57115 | 22368653 ~ 22384989 (-) |
| LOC110527516 | LOC106575207 | coding | upstream | 144655 | 22456193 ~ 22460210 (-) |
| cep70 | LOC106575208 | coding | upstream | 159297 | 22470835 ~ 22478890 (-) |
| LOC110527519 | LOC106575210 | coding | upstream | 176347 | 22487885 ~ 22515173 (-) |
| G586306 | NA | non-coding | downstream | 21956 | 22288914 ~ 22289410 (-) |
| G586024 | NA | non-coding | downstream | 27341 | 22283546 ~ 22284025 (-) |
| G586015 | NA | non-coding | downstream | 31911 | 22279055 ~ 22279455 (-) |
| G585745 | NA | non-coding | downstream | 239338 | 22071750 ~ 22072028 (-) |
| G585576 | NA | non-coding | downstream | 355808 | 21955339 ~ 21955558 (-) |
| G586319 | NA | non-coding | upstream | 740 | 22312278 ~ 22312497 (-) |
| G586322 | NA | non-coding | upstream | 4965 | 22316503 ~ 22316737 (-) |
| G586392 | NA | non-coding | upstream | 132748 | 22444286 ~ 22444523 (-) |
| G586405 | NA | non-coding | upstream | 134410 | 22445948 ~ 22446181 (-) |
| G586411 | NA | non-coding | upstream | 142723 | 22454261 ~ 22454824 (-) |
| LOC110527499 | LOC106575189 | other | downstream | 792493 | 21513832 ~ 21583054 (-) |
| G585240 | LOC106575179 | other | downstream | 886781 | 21421454 ~ 21424585 (-) |
| LOC110527470 | LOC103366558 | other | downstream | 1472030 | 20838415 ~ 20839399 (-) |
| otos2 | LOC106575250 | other | downstream | 1533301 | 20772867 ~ 20778065 (-) |
| G586414 | LOC106574278 | other | upstream | 151670 | 22463208 ~ 22470518 (-) |
| LOC110527522 | LOC106575212 | other | upstream | 298623 | 22609884 ~ 22620248 (-) |
| LOC110527529 | ngl1 | other | upstream | 497115 | 22807676 ~ 22812906 (-) |
| G586878 | NA | other | upstream | 772952 | 23084490 ~ 23087137 (-) |
| LOC110527533 | s100b | other | upstream | 850356 | 23161894 ~ 23165209 (-) |
