G586044


Basic Information

Item Value
gene id G586044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 22315743 ~ 22316002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU668434
gtgatttcctgcaagacaggaatgtagGTGTTCTAagatggccagcgaagagcccggatctcaatcccattgagcatgtctgctacctgttggatcggagggtgagggctagggccattgaGAATGCTCTTGTAGAGTTGTGGCAGGTTTAGAACTTCGCACTTGTATTGACTAGTAGTATTCACCAGTATGTGAACGCTCTCCCTGTATAGTTGTATCATTTTGGGCAGGTTGATCTTGTCTCCCCAAAGCAGCCAGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU668434 True 260 lncRNA 0.48 1 22315743 22316002

Neighbor

gene id symbol gene type direction distance location
LOC110527508 LOC106574269 coding upstream 3905 22290515 ~ 22312038 (+)
sts sts coding upstream 489718 21812987 ~ 21826025 (+)
LOC110527503 LOC106575196 coding upstream 525564 21762128 ~ 21790179 (+)
LOC100136615 LOC100136615 coding upstream 564218 21749340 ~ 21799872 (+)
LOC110527502 LOC106575193 coding upstream 571743 21737749 ~ 21744000 (+)
mxra5a LOC106574270 coding downstream 11569 22327571 ~ 22347037 (+)
c7h10orf53 cssa17h10orf53 coding downstream 40498 22356500 ~ 22360232 (+)
LOC118936317 LOC106574274 coding downstream 69868 22385870 ~ 22416150 (+)
LOC110527515 LOC106575209 coding downstream 144308 22460310 ~ 22470522 (+)
LOC110528815 ftcd coding downstream 305001 22621003 ~ 22634558 (+)
G586043 NA non-coding upstream 24 22315480 ~ 22315719 (+)
G586031 NA non-coding upstream 26408 22289047 ~ 22289335 (+)
G585855 hdd1a non-coding upstream 84902 22227672 ~ 22230841 (+)
G585818 NA non-coding upstream 129599 22162860 ~ 22186144 (+)
G586045 NA non-coding downstream 143 22316145 ~ 22316373 (+)
G586047 NA non-coding downstream 1074 22317076 ~ 22349230 (+)
G586079 NA non-coding downstream 52671 22368673 ~ 22370163 (+)
G586080 NA non-coding downstream 62380 22378382 ~ 22384934 (+)
G585573 NA other upstream 362474 21953029 ~ 21953269 (+)
G584643 NA other upstream 1233128 21080828 ~ 21082615 (+)
G583605 NA other upstream 2075946 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 2294016 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 3338744 18976678 ~ 18976999 (+)
LOC110527523 stat1-2 other downstream 370487 22684527 ~ 22722539 (+)
G586685 NA other downstream 694059 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 1295350 23609520 ~ 23621369 (+)
G587660 NA other downstream 1491720 23807722 ~ 23808000 (+)

Expression


Co-expression Network