G586411


Basic Information

Item Value
gene id G586411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 22454261 ~ 22454824 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU668847
TCATTGTCTCACATGTACTAGTCTAATTGTTTGTCTAGATTAGATTTAAGGCCTACTACATATGGCATTAACTGTTTTTGGGCAATTTAATGGTTTCTCAGTCAATGGTTTTTTATTGCTGAATAGCCTACAGAAATGCTACATAGTTTACTGATTTTGCTACTTGATTTTATTGTACAGTTTTGTATTCTTGCAAAATTAGCTCTTACCTTTTTATTATGCAATTATAATTTTTTGTTCTTTTATCAACCACCTGCTGCTAATTATGATATTCAAAGGGCTGGAACGGTATTTCTCTTGTCTGTCTGTACATTCAATTATATTATAGTCCTCTTTTTGATGATCAAACAAAAGAATGTTAACATAAACAAATCTTGACACCTCACTGTCTACAATCATTTAAGATCCCATGTTCAGTACTCTCTGTCTTCAATAATGTTTTCAAAGCTAGATTGTGGAGTCTGTATTTTTATCATTTGGAAACCTATTCCTACATCTTTGTGTTGCTTAACAGAAATATCAAACTACCGTTAGCTCTGCCTTTACCCAACCTGATAAATAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU668847 True 564 lncRNA 0.32 1 22454261 22454824

Neighbor

gene id symbol gene type direction distance location
cd99 NA coding downstream 69272 22368653 ~ 22384989 (-)
LOC110512351 LOC106575201 coding downstream 85824 22362161 ~ 22368437 (-)
pudp hdd1a coding downstream 223519 22213623 ~ 22230742 (-)
LOC110527506 LOC106575199 coding downstream 290266 22089741 ~ 22163995 (-)
LOC118965269 pnpla4 coding downstream 622702 21829164 ~ 21831559 (-)
LOC110527516 LOC106575207 coding upstream 1369 22456193 ~ 22460210 (-)
cep70 LOC106575208 coding upstream 16011 22470835 ~ 22478890 (-)
LOC110527519 LOC106575210 coding upstream 33061 22487885 ~ 22515173 (-)
fam207a cu070 coding upstream 108457 22563281 ~ 22587668 (-)
plcd4a LOC106575211 coding upstream 133022 22587846 ~ 22609469 (-)
G586405 NA non-coding downstream 8080 22445948 ~ 22446181 (-)
G586392 NA non-coding downstream 9738 22444286 ~ 22444523 (-)
G586322 NA non-coding downstream 137524 22316503 ~ 22316737 (-)
G586319 NA non-coding downstream 141764 22312278 ~ 22312497 (-)
G586313 NA non-coding downstream 142723 22311366 ~ 22311538 (-)
G586414 LOC106574278 non-coding upstream 9947 22463208 ~ 22470518 (-)
G586398 NA non-coding upstream 31460 22486284 ~ 22543581 (-)
G586488 NA non-coding upstream 109658 22564482 ~ 22605033 (-)
G586522 NA non-coding upstream 166175 22620999 ~ 22624553 (-)
G586539 NA non-coding upstream 230741 22685565 ~ 22685824 (-)
LOC110527499 LOC106575189 other downstream 935388 21513832 ~ 21583054 (-)
G585240 LOC106575179 other downstream 1029676 21421454 ~ 21424585 (-)
LOC110527470 LOC103366558 other downstream 1614925 20838415 ~ 20839399 (-)
otos2 LOC106575250 other downstream 1676196 20772867 ~ 20778065 (-)
LOC110527522 LOC106575212 other upstream 155337 22609884 ~ 22620248 (-)
LOC110527529 ngl1 other upstream 353829 22807676 ~ 22812906 (-)
G586878 NA other upstream 629666 23084490 ~ 23087137 (-)
LOC110527533 s100b other upstream 707070 23161894 ~ 23165209 (-)

Expression


Co-expression Network