Gene
RNA
| Item | Value |
|---|---|
| gene id | G586398 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 22486284 ~ 22543581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU668834 | True | 409 | lncRNA | 0.46 | 2 | 22486284 | 22543581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cep70 | LOC106575208 | coding | downstream | 7394 | 22470835 ~ 22478890 (-) |
| LOC110527516 | LOC106575207 | coding | downstream | 26074 | 22456193 ~ 22460210 (-) |
| cd99 | NA | coding | downstream | 101295 | 22368653 ~ 22384989 (-) |
| LOC110512351 | LOC106575201 | coding | downstream | 117847 | 22362161 ~ 22368437 (-) |
| pudp | hdd1a | coding | downstream | 255542 | 22213623 ~ 22230742 (-) |
| fam207a | cu070 | coding | upstream | 19700 | 22563281 ~ 22587668 (-) |
| plcd4a | LOC106575211 | coding | upstream | 44265 | 22587846 ~ 22609469 (-) |
| LOC110527522 | LOC106575212 | coding | upstream | 66303 | 22609884 ~ 22620248 (-) |
| stat1-2 | stat1-2 | coding | upstream | 94509 | 22638090 ~ 22668102 (-) |
| mstn2a | mstn2a | coding | upstream | 134867 | 22678448 ~ 22679952 (-) |
| G586414 | LOC106574278 | non-coding | downstream | 20843 | 22463208 ~ 22470518 (-) |
| G586411 | NA | non-coding | downstream | 31460 | 22454261 ~ 22454824 (-) |
| G586405 | NA | non-coding | downstream | 40103 | 22445948 ~ 22446181 (-) |
| G586392 | NA | non-coding | downstream | 41761 | 22444286 ~ 22444523 (-) |
| G586322 | NA | non-coding | downstream | 169547 | 22316503 ~ 22316737 (-) |
| G586488 | NA | non-coding | upstream | 20901 | 22564482 ~ 22605033 (-) |
| G586522 | NA | non-coding | upstream | 77418 | 22620999 ~ 22624553 (-) |
| G586539 | NA | non-coding | upstream | 141984 | 22685565 ~ 22685824 (-) |
| G586541 | NA | non-coding | upstream | 144118 | 22687699 ~ 22703875 (-) |
| G586543 | NA | non-coding | upstream | 148100 | 22691681 ~ 22692118 (-) |
| LOC110527506 | LOC106575199 | other | downstream | 391945 | 22089741 ~ 22163995 (-) |
| LOC110527499 | LOC106575189 | other | downstream | 967411 | 21513832 ~ 21583054 (-) |
| G585240 | LOC106575179 | other | downstream | 1061699 | 21421454 ~ 21424585 (-) |
| LOC110527470 | LOC103366558 | other | downstream | 1646948 | 20838415 ~ 20839399 (-) |
| LOC110527529 | ngl1 | other | upstream | 265072 | 22807676 ~ 22812906 (-) |
| G586878 | NA | other | upstream | 540909 | 23084490 ~ 23087137 (-) |
| LOC110527533 | s100b | other | upstream | 618313 | 23161894 ~ 23165209 (-) |
| G587242 | NA | other | upstream | 831431 | 23375012 ~ 23377701 (-) |
