Gene
RNA
| Item | Value |
|---|---|
| gene id | G586539 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 22685565 ~ 22685824 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| signal transducer and activator of transcription 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU668995 | True | 260 | lncRNA | 0.45 | 1 | 22685565 | 22685824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mstn2a | mstn2a | coding | downstream | 5613 | 22678448 ~ 22679952 (-) |
| stat1-2 | stat1-2 | coding | downstream | 17463 | 22638090 ~ 22668102 (-) |
| LOC110527522 | LOC106575212 | coding | downstream | 65317 | 22609884 ~ 22620248 (-) |
| plcd4a | LOC106575211 | coding | downstream | 76096 | 22587846 ~ 22609469 (-) |
| fam207a | cu070 | coding | downstream | 97897 | 22563281 ~ 22587668 (-) |
| glsa | LOC106575215 | coding | upstream | 39455 | 22725279 ~ 22746080 (-) |
| LOC110527525 | clcc1 | coding | upstream | 61786 | 22747610 ~ 22768921 (-) |
| LOC110527526 | LOC106575217 | coding | upstream | 101733 | 22787557 ~ 22792363 (-) |
| LOC110527527 | LOC106575218 | coding | upstream | 112100 | 22797924 ~ 22807497 (-) |
| LOC110527529 | ngl1 | coding | upstream | 121852 | 22807676 ~ 22812906 (-) |
| G586522 | NA | non-coding | downstream | 61012 | 22620999 ~ 22624553 (-) |
| G586488 | NA | non-coding | downstream | 80532 | 22564482 ~ 22605033 (-) |
| G586398 | NA | non-coding | downstream | 141984 | 22486284 ~ 22543581 (-) |
| G586414 | LOC106574278 | non-coding | downstream | 220124 | 22463208 ~ 22470518 (-) |
| G586411 | NA | non-coding | downstream | 230741 | 22454261 ~ 22454824 (-) |
| G586541 | NA | non-coding | upstream | 1875 | 22687699 ~ 22703875 (-) |
| G586543 | NA | non-coding | upstream | 5857 | 22691681 ~ 22692118 (-) |
| G586485 | NA | non-coding | upstream | 38046 | 22723870 ~ 22724435 (-) |
| G586570 | NA | non-coding | upstream | 87583 | 22773407 ~ 22773606 (-) |
| G586574 | NA | non-coding | upstream | 94218 | 22780042 ~ 22780263 (-) |
| LOC110527506 | LOC106575199 | other | downstream | 591226 | 22089741 ~ 22163995 (-) |
| LOC110527499 | LOC106575189 | other | downstream | 1166692 | 21513832 ~ 21583054 (-) |
| G585240 | LOC106575179 | other | downstream | 1260980 | 21421454 ~ 21424585 (-) |
| G586878 | NA | other | upstream | 398666 | 23084490 ~ 23087137 (-) |
| LOC110527533 | s100b | other | upstream | 476070 | 23161894 ~ 23165209 (-) |
| G587242 | NA | other | upstream | 689188 | 23375012 ~ 23377701 (-) |
| G588987 | NA | other | upstream | 2142664 | 24828488 ~ 24828700 (-) |
