G586845


Basic Information

Item Value
gene id G586845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 22992422 ~ 22994686 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU669338
TTTATGTCATATACACAacataggtgcagtgaaatgtgttttttttttaccaggtcagccatagtagtacgaaACCCCTGGAACAAATTATAGTTAAATGCCttcctcaagggcacattgagttgtttcaccttgtcagctcaggtattcaaaccagcgacctttcggttactggcccgatggtctaaccgccaggctacctgaCTTGTCTACGGCGTCAGTAAACCCGGCTGTTATCCAGACGTAGTCCATAATCTTGTCGAACAGCATTTGGACTGTAATGTCCCTCTAGTCTGCTTCCACACTATCATTAACTCATGACCTACTGCACCTCCGGGTGGGCAACTTGTTGCACTCCAGATCAGATCAGCTGGCTGGCATGCCCTGCCTGGCGTGACCTTGTTTTGTTATCCTCATCATGCCAGTGTCTCCGTGGGCATGAGAGCATAGCTAACAGCCTTCATTCATTTGGCTCTGCCCTGATGAATTCAAATCACAGCAGAATGGACGGCTTGTTCAGACTCACTGCGTTCCTTGTGTAAACCATGCTGTACTTTTGGCAAGCACCCACAGCCATTATGGAAGCATTCAACAACCTTTTAAGTGCCTGGCTGGCACAGTGGCAGAGGCAGAATAGAGGTGTGGGTACAGAGGCAGAATAGGTTTGTGGGTACAGaggcagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataagtgagTACATGTGTACTAAGGTgtggagaatcagagcaggtggtcagtccagttcagtccaatccagttcaagtgttcagcagtgtaatggcttgtagatagaaactgtctctgagcctgttggtatcagacctcatgcgcTGATGCCTTCTGCCCGACTGTAAGGTAGAGAACAGCTTGTGGCTGTGGTGtgtggggttaaggttagggttaggtttagggttaggtttagggttaggggttagggaaaataaaatgggattttgaatgggaatcaattgtcgGTTTCTAaaaagtcctcacaagtatagtaagacatagttgtgtgtgtgtgtgtgtgtctgtgtttatgcctgcttgagtgtgtgcatgcatgcttgtgtgtgtgtgcctgtgtcttaGCATGTGTCTGGTGTTTCTCAGTAATCGTCCTCACCCTCCGTCCCCCGTCCCCGGGTCCAGAGATCAGTTTGAAGTTTGAAGCCCCCCAGCTTTGGTTGTCTCTTTCTCAGCTCTATGTGCAGCTGGTGCTGCAGCTGGTGCTACAGCGAtagtgccatttgggaagtctACAGTGTCAGTCAGACGCCAGCTGCTCTGCTCTGTACTGTAGGAAACCAAGCAGCCCTCAGCACAGAGCAGCACTCCCCTGGCACAGCACCAGCATTTACCTAACCTTATGGAGATGAATCAAGAAACCCAGCCATGTTTACATAAGCTAAGTGTCTTCAGGCACAAATCCACCATCCACAAGAAAAAcgcccttcaggttggaggtagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagacgcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacaaagaaaacacccttcaggttggaggtagagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacataaagaaaacacccttcaggttggaggtagagaggagactcagtgacaaagaaaacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU669338 True 1992 lncRNA 0.48 3 22992422 22994686

Neighbor

gene id symbol gene type direction distance location
ahr1b ahr1b coding downstream 84284 22832299 ~ 22908138 (-)
LOC110527529 ngl1 coding downstream 179516 22807676 ~ 22812906 (-)
LOC110527527 LOC106575218 coding downstream 184925 22797924 ~ 22807497 (-)
LOC110527526 LOC106575217 coding downstream 200059 22787557 ~ 22792363 (-)
LOC110527525 clcc1 coding downstream 223501 22747610 ~ 22768921 (-)
LOC118965270 NA coding upstream 53345 23048031 ~ 23053093 (-)
LOC118965271 NA coding upstream 71303 23065989 ~ 23098610 (-)
LOC110527532 LOC106575221 coding upstream 111956 23106642 ~ 23133644 (-)
LOC110527533 s100b coding upstream 167904 23161894 ~ 23165209 (-)
LOC110527539 LOC106575227 coding upstream 322903 23317589 ~ 23320557 (-)
G586843 NA non-coding downstream 4880 22959662 ~ 22987542 (-)
G586844 NA non-coding downstream 33754 22953342 ~ 22958668 (-)
G586590 NA non-coding downstream 172640 22819543 ~ 22819782 (-)
G586872 NA non-coding upstream 67493 23062179 ~ 23062671 (-)
G586876 NA non-coding upstream 77857 23072543 ~ 23082380 (-)
G586877 NA non-coding upstream 78663 23073349 ~ 23083164 (-)
G586890 NA non-coding upstream 109491 23104177 ~ 23104473 (-)
G586908 NA non-coding upstream 150295 23144981 ~ 23145245 (-)
LOC110527522 LOC106575212 other downstream 372306 22609884 ~ 22620248 (-)
G586414 LOC106574278 other downstream 521904 22463208 ~ 22470518 (-)
LOC110527506 LOC106575199 other downstream 898083 22089741 ~ 22163995 (-)
LOC110527499 LOC106575189 other downstream 1473549 21513832 ~ 21583054 (-)
G586878 NA other upstream 89804 23084490 ~ 23087137 (-)
G587242 NA other upstream 380326 23375012 ~ 23377701 (-)
G588987 NA other upstream 1833802 24828488 ~ 24828700 (-)
G589093 NA other upstream 1976927 24971613 ~ 24979107 (-)

Expression


Co-expression Network