G587007


Basic Information

Item Value
gene id G587007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 23244719 ~ 23244974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU669526
GCTATAAGGAGCCCATTAGATGTTGGAGTTGAGTACTAGTTTCTGCCCTCCATGCcccttttctcttcttctacttcttcatCTTCAACTGAATTTCCTAGTCGATTTAAATAGCCTGATTTCTCTAATGGGTCTACTTCAGGTGGTAAGTATTACTAGTGACTCCATAGGCGTATAATTGCATATACTTTATGTTTCTCTATATAGTCAAGTACATGGCTGGTAAAAAAGTGGCCATTTATTAAACGGCCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU669526 True 256 lncRNA 0.39 1 23244719 23244974

Neighbor

gene id symbol gene type direction distance location
LOC110527536 LOC106575223 coding upstream 13985 23227353 ~ 23230734 (+)
LOC110527535 LOC106575222 coding upstream 23716 23193574 ~ 23221003 (+)
LOC110527523 stat1-2 coding upstream 522180 22684527 ~ 22722539 (+)
LOC110528815 ftcd coding upstream 610161 22621003 ~ 22634558 (+)
LOC110527515 LOC106575209 coding upstream 774197 22460310 ~ 22470522 (+)
aox6 LOC106575224 coding downstream 26829 23271803 ~ 23289814 (+)
LOC110527538 LOC106575225 coding downstream 61842 23306816 ~ 23317470 (+)
LOC110527540 LOC106533352 coding downstream 364546 23609520 ~ 23621369 (+)
LOC110527542 LOC106574301 coding downstream 1064864 24309838 ~ 24352001 (+)
LOC110527543 LOC106575235 coding downstream 1113694 24358668 ~ 24426341 (+)
G587001 NA non-coding upstream 2742 23241757 ~ 23241977 (+)
G586998 NA non-coding upstream 5141 23239256 ~ 23239578 (+)
G586917 NA non-coding upstream 77103 23167358 ~ 23167616 (+)
G586760 NA non-coding upstream 78559 23161633 ~ 23166160 (+)
G586755 NA non-coding upstream 88368 23156102 ~ 23156351 (+)
G587061 NA non-coding downstream 121870 23366844 ~ 23425348 (+)
G587351 NA non-coding downstream 314646 23559620 ~ 23559956 (+)
G587423 NA non-coding downstream 360777 23605751 ~ 23606028 (+)
G587460 NA non-coding downstream 395225 23640199 ~ 23640452 (+)
G586685 NA other upstream 229599 23010061 ~ 23015120 (+)
c7h10orf53 cssa17h10orf53 other upstream 884492 22356500 ~ 22360232 (+)
G585573 NA other upstream 1291450 21953029 ~ 21953269 (+)
G584643 NA other upstream 2162104 21080828 ~ 21082615 (+)
G587660 NA other downstream 562748 23807722 ~ 23808000 (+)
G588755 NA other downstream 1659357 24904331 ~ 24905581 (+)
G589734 NA other downstream 2358631 25587088 ~ 25608606 (+)
G589933 NA other downstream 2758956 26003930 ~ 26025309 (+)

Expression


Co-expression Network