G587461


Basic Information

Item Value
gene id G587461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 23640465 ~ 23640793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU670055
gtccttgatgatctttttgaccttcctgtgacattgggtgccgTAGGTGTCAGGgagtgcaggtagtttgcccccggtgatgcgttgtgcagaccgcaccaccctctggagagccttgcgggttgagggtggtgcagttgccgtaccaggctgtgatacagcccgacaggaggctctcgattgtgcatctgtaaaagtttatcAGGGTTTTTCTTGTGATaatccaaatttcttcagcctcctgaggttgaagaggcgctgttgcgccttcttcaccacactgtctgtgtgggtggaccattcagtttgtctgtgatgtgtacgccgag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU670055 True 329 lncRNA 0.53 1 23640465 23640793

Neighbor

gene id symbol gene type direction distance location
LOC110527540 LOC106533352 coding upstream 19414 23609520 ~ 23621369 (+)
LOC110527538 LOC106575225 coding upstream 322995 23306816 ~ 23317470 (+)
aox6 LOC106575224 coding upstream 350651 23271803 ~ 23289814 (+)
LOC110527536 LOC106575223 coding upstream 409731 23227353 ~ 23230734 (+)
LOC110527535 LOC106575222 coding upstream 419462 23193574 ~ 23221003 (+)
LOC110527542 LOC106574301 coding downstream 669045 24309838 ~ 24352001 (+)
LOC110527543 LOC106575235 coding downstream 717875 24358668 ~ 24426341 (+)
gja5b LOC106574307 coding downstream 932613 24573406 ~ 24583614 (+)
setd4 setd4 coding downstream 1082833 24723626 ~ 24732898 (+)
itsn1 LOC100286499 coding downstream 1097404 24738197 ~ 24800444 (+)
G587460 NA non-coding upstream 13 23640199 ~ 23640452 (+)
G587423 NA non-coding upstream 34437 23605751 ~ 23606028 (+)
G587351 NA non-coding upstream 80509 23559620 ~ 23559956 (+)
G587061 NA non-coding upstream 215117 23366844 ~ 23425348 (+)
G587470 NA non-coding downstream 3928 23644721 ~ 23644941 (+)
G587539 NA non-coding downstream 64681 23705474 ~ 23705866 (+)
G587566 NA non-coding downstream 92786 23733579 ~ 23733896 (+)
G587581 NA non-coding downstream 101964 23742757 ~ 23743065 (+)
G587637 NA non-coding downstream 134320 23775113 ~ 23775945 (+)
G586685 NA other upstream 625345 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 936644 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 1280238 22356500 ~ 22360232 (+)
G585573 NA other upstream 1687196 21953029 ~ 21953269 (+)
G587660 NA other downstream 166929 23807722 ~ 23808000 (+)
G588755 NA other downstream 1263538 24904331 ~ 24905581 (+)
G589734 NA other downstream 1962812 25587088 ~ 25608606 (+)
G589933 NA other downstream 2363137 26003930 ~ 26025309 (+)
G590936 gart other downstream 2911761 26552554 ~ 26553542 (+)

Expression


Co-expression Network