G587539


Basic Information

Item Value
gene id G587539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 23705474 ~ 23705866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU670133
atttgagattcatcaaagtagccatcctttgccttgatgacagctttgcacactcttggcattccctcaaccagcttcatgaggaaggcttttcaaactgtcttgaaggagttcccacatatgctgagcactagttggctgcttttccttcactctgcggtccaactcatcccaaaccatctcaattgggttgaggtcgggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttggtcaaatagcccttacacagcctggaggtatgttttgggtcattgtcctgttgaaaaacaattgatagtACTACAAAGtaaaaaccagatgggatggcgtaccgctgcagaatgctgtggtagccatgctggttaagtttgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU670133 True 393 lncRNA 0.47 1 23705474 23705866

Neighbor

gene id symbol gene type direction distance location
LOC110527540 LOC106533352 coding upstream 84423 23609520 ~ 23621369 (+)
LOC110527538 LOC106575225 coding upstream 388004 23306816 ~ 23317470 (+)
aox6 LOC106575224 coding upstream 415660 23271803 ~ 23289814 (+)
LOC110527536 LOC106575223 coding upstream 474740 23227353 ~ 23230734 (+)
LOC110527535 LOC106575222 coding upstream 484471 23193574 ~ 23221003 (+)
LOC110527542 LOC106574301 coding downstream 603972 24309838 ~ 24352001 (+)
LOC110527543 LOC106575235 coding downstream 652802 24358668 ~ 24426341 (+)
gja5b LOC106574307 coding downstream 867540 24573406 ~ 24583614 (+)
setd4 setd4 coding downstream 1017760 24723626 ~ 24732898 (+)
itsn1 LOC100286499 coding downstream 1032331 24738197 ~ 24800444 (+)
G587470 NA non-coding upstream 60533 23644721 ~ 23644941 (+)
G587461 NA non-coding upstream 64681 23640465 ~ 23640793 (+)
G587460 NA non-coding upstream 65022 23640199 ~ 23640452 (+)
G587423 NA non-coding upstream 99446 23605751 ~ 23606028 (+)
G587566 NA non-coding downstream 27713 23733579 ~ 23733896 (+)
G587581 NA non-coding downstream 36891 23742757 ~ 23743065 (+)
G587637 NA non-coding downstream 69247 23775113 ~ 23775945 (+)
G587643 NA non-coding downstream 84680 23790546 ~ 23791006 (+)
G587654 NA non-coding downstream 95911 23801777 ~ 23802072 (+)
G586685 NA other upstream 690354 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 1001653 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 1345247 22356500 ~ 22360232 (+)
G585573 NA other upstream 1752205 21953029 ~ 21953269 (+)
G587660 NA other downstream 101856 23807722 ~ 23808000 (+)
G588755 NA other downstream 1198465 24904331 ~ 24905581 (+)
G589734 NA other downstream 1897739 25587088 ~ 25608606 (+)
G589933 NA other downstream 2298064 26003930 ~ 26025309 (+)
G590936 gart other downstream 2846688 26552554 ~ 26553542 (+)

Expression


Co-expression Network