G587666


Basic Information

Item Value
gene id G587666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 23819601 ~ 23819886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU670261
GTATAGCCCTTGtttctctccagacctgaatgcccttgaccagcacaaaaacatcctgtggcgttctgcattagcatcgaatagcccccgtgatatgcaacttttcagggaagttaggaaccaatatacacaggcagttaggaaagctaaggctagcttattcaagcagaaatttgcatcctgtagcaaaaactcccaaaagttctgggacactgtaaagtccatggagaataagagcacctcctcccagctgtccacagcactgagactaggaaacactgtcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU670261 True 286 lncRNA 0.47 1 23819601 23819886

Neighbor

gene id symbol gene type direction distance location
LOC110527540 LOC106533352 coding upstream 198550 23609520 ~ 23621369 (+)
LOC110527538 LOC106575225 coding upstream 502131 23306816 ~ 23317470 (+)
aox6 LOC106575224 coding upstream 529787 23271803 ~ 23289814 (+)
LOC110527536 LOC106575223 coding upstream 588867 23227353 ~ 23230734 (+)
LOC110527535 LOC106575222 coding upstream 598598 23193574 ~ 23221003 (+)
LOC110527542 LOC106574301 coding downstream 489952 24309838 ~ 24352001 (+)
LOC110527543 LOC106575235 coding downstream 538782 24358668 ~ 24426341 (+)
gja5b LOC106574307 coding downstream 753520 24573406 ~ 24583614 (+)
setd4 setd4 coding downstream 903740 24723626 ~ 24732898 (+)
itsn1 LOC100286499 coding downstream 918311 24738197 ~ 24800444 (+)
G587665 NA non-coding upstream 526 23818853 ~ 23819075 (+)
G587655 NA non-coding upstream 15885 23803416 ~ 23803716 (+)
G587654 NA non-coding upstream 17529 23801777 ~ 23802072 (+)
G587643 NA non-coding upstream 28595 23790546 ~ 23791006 (+)
G587637 NA non-coding upstream 43656 23775113 ~ 23775945 (+)
G587667 NA non-coding downstream 365 23820251 ~ 23820584 (+)
G587670 NA non-coding downstream 3241 23823127 ~ 23823349 (+)
G587758 LOC106575232 non-coding downstream 57084 23876970 ~ 23932317 (+)
G587847 NA non-coding downstream 120272 23940158 ~ 23941432 (+)
G587876 NA non-coding downstream 151867 23971753 ~ 23972009 (+)
G587660 NA other upstream 11601 23807722 ~ 23808000 (+)
G586685 NA other upstream 804481 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 1115780 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 1459374 22356500 ~ 22360232 (+)
G588755 NA other downstream 1084445 24904331 ~ 24905581 (+)
G589734 NA other downstream 1783719 25587088 ~ 25608606 (+)
G589933 NA other downstream 2184044 26003930 ~ 26025309 (+)
G590936 gart other downstream 2732668 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 2757521 26577407 ~ 26577933 (+)

Expression


Co-expression Network