Gene
RNA
| Item | Value |
|---|---|
| gene id | G588300 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 24335435 ~ 24403052 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU670944 | True | 498 | lncRNA | 0.53 | 2 | 24335435 | 24403052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527540 | LOC106533352 | coding | upstream | 714384 | 23609520 ~ 23621369 (+) |
| LOC110527538 | LOC106575225 | coding | upstream | 1017965 | 23306816 ~ 23317470 (+) |
| aox6 | LOC106575224 | coding | upstream | 1045621 | 23271803 ~ 23289814 (+) |
| LOC110527536 | LOC106575223 | coding | upstream | 1104701 | 23227353 ~ 23230734 (+) |
| LOC110527535 | LOC106575222 | coding | upstream | 1114432 | 23193574 ~ 23221003 (+) |
| gja5b | LOC106574307 | coding | downstream | 170354 | 24573406 ~ 24583614 (+) |
| setd4 | setd4 | coding | downstream | 320574 | 24723626 ~ 24732898 (+) |
| itsn1 | LOC100286499 | coding | downstream | 335145 | 24738197 ~ 24800444 (+) |
| LOC110527557 | pknx1 | coding | downstream | 408323 | 24811375 ~ 24820304 (+) |
| pdxkb | LOC106574311 | coding | downstream | 434232 | 24837284 ~ 24870911 (+) |
| G588263 | NA | non-coding | upstream | 56099 | 24278943 ~ 24279336 (+) |
| G588115 | NA | non-coding | upstream | 60639 | 24180245 ~ 24274796 (+) |
| G588080 | NA | non-coding | upstream | 204721 | 24130401 ~ 24130714 (+) |
| G588051 | NA | non-coding | upstream | 224980 | 24110209 ~ 24110455 (+) |
| G587876 | NA | non-coding | upstream | 363426 | 23971753 ~ 23972009 (+) |
| G588364 | NA | non-coding | downstream | 55171 | 24458223 ~ 24458487 (+) |
| G588365 | NA | non-coding | downstream | 57008 | 24460060 ~ 24460271 (+) |
| G588368 | NA | non-coding | downstream | 58082 | 24461134 ~ 24462883 (+) |
| G588372 | NA | non-coding | downstream | 73144 | 24476196 ~ 24492509 (+) |
| G588538 | NA | non-coding | downstream | 105830 | 24508882 ~ 24509314 (+) |
| G587660 | NA | other | upstream | 527435 | 23807722 ~ 23808000 (+) |
| G586685 | NA | other | upstream | 1320315 | 23010061 ~ 23015120 (+) |
| LOC110527523 | stat1-2 | other | upstream | 1631614 | 22684527 ~ 22722539 (+) |
| c7h10orf53 | cssa17h10orf53 | other | upstream | 1975208 | 22356500 ~ 22360232 (+) |
| G588755 | NA | other | downstream | 501279 | 24904331 ~ 24905581 (+) |
| G589734 | NA | other | downstream | 1200553 | 25587088 ~ 25608606 (+) |
| G589933 | NA | other | downstream | 1600878 | 26003930 ~ 26025309 (+) |
| G590936 | gart | other | downstream | 2149502 | 26552554 ~ 26553542 (+) |
| G590949 | LOC106575121 | other | downstream | 2174355 | 26577407 ~ 26577933 (+) |
