G588364


Basic Information

Item Value
gene id G588364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 24458223 ~ 24458487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU671008
tttctcccaaggatgaaccagacttgtggaggtctacaattgttttcttttgaatttcccatgaggtcaagcaaagaggcactgagtttaatggtaggccttgaaatacacccacaggtacacctccaattgactcaaattatgtcaattagcctatcagaatcttctaaagccatgacatcattttctggagttttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacgtctgacccactggaattgtggtgcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU671008 True 265 lncRNA 0.41 1 24458223 24458487

Neighbor

gene id symbol gene type direction distance location
LOC110527543 LOC106575235 coding upstream 82471 24358668 ~ 24426341 (+)
LOC110527542 LOC106574301 coding upstream 106222 24309838 ~ 24352001 (+)
LOC110527540 LOC106533352 coding upstream 837172 23609520 ~ 23621369 (+)
LOC110527538 LOC106575225 coding upstream 1140753 23306816 ~ 23317470 (+)
aox6 LOC106575224 coding upstream 1168409 23271803 ~ 23289814 (+)
gja5b LOC106574307 coding downstream 114919 24573406 ~ 24583614 (+)
setd4 setd4 coding downstream 265139 24723626 ~ 24732898 (+)
itsn1 LOC100286499 coding downstream 279710 24738197 ~ 24800444 (+)
LOC110527557 pknx1 coding downstream 352888 24811375 ~ 24820304 (+)
pdxkb LOC106574311 coding downstream 378797 24837284 ~ 24870911 (+)
G588300 NA non-coding upstream 55171 24335435 ~ 24403052 (+)
G588263 NA non-coding upstream 178887 24278943 ~ 24279336 (+)
G588115 NA non-coding upstream 183427 24180245 ~ 24274796 (+)
G588080 NA non-coding upstream 327509 24130401 ~ 24130714 (+)
G588365 NA non-coding downstream 1573 24460060 ~ 24460271 (+)
G588368 NA non-coding downstream 2647 24461134 ~ 24462883 (+)
G588372 NA non-coding downstream 17709 24476196 ~ 24492509 (+)
G588538 NA non-coding downstream 50395 24508882 ~ 24509314 (+)
G588546 NA non-coding downstream 58500 24516987 ~ 24517435 (+)
G587660 NA other upstream 650223 23807722 ~ 23808000 (+)
G586685 NA other upstream 1443103 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 1754402 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 2097996 22356500 ~ 22360232 (+)
G588755 NA other downstream 445844 24904331 ~ 24905581 (+)
G589734 NA other downstream 1145118 25587088 ~ 25608606 (+)
G589933 NA other downstream 1545443 26003930 ~ 26025309 (+)
G590936 gart other downstream 2094067 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 2118920 26577407 ~ 26577933 (+)

Expression


Co-expression Network