G588365


Basic Information

Item Value
gene id G588365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 24460060 ~ 24460271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU671009
gtatacatctggcccttctttggacactgtgttaacaaacctccaaacaagcttcaatgccatacaactctccttccgtggcctccaactgctcttaaatgctagtaaaactaaatgcatgctcttcaaccgatcgctgcccgcacccgcccacctgactagcatcactactctggacggttctgacttagaatatgtggacaactacaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU671009 True 212 lncRNA 0.47 1 24460060 24460271

Neighbor

gene id symbol gene type direction distance location
LOC110527543 LOC106575235 coding upstream 84308 24358668 ~ 24426341 (+)
LOC110527542 LOC106574301 coding upstream 108059 24309838 ~ 24352001 (+)
LOC110527540 LOC106533352 coding upstream 839009 23609520 ~ 23621369 (+)
LOC110527538 LOC106575225 coding upstream 1142590 23306816 ~ 23317470 (+)
aox6 LOC106575224 coding upstream 1170246 23271803 ~ 23289814 (+)
gja5b LOC106574307 coding downstream 113135 24573406 ~ 24583614 (+)
setd4 setd4 coding downstream 263355 24723626 ~ 24732898 (+)
itsn1 LOC100286499 coding downstream 277926 24738197 ~ 24800444 (+)
LOC110527557 pknx1 coding downstream 351104 24811375 ~ 24820304 (+)
pdxkb LOC106574311 coding downstream 377013 24837284 ~ 24870911 (+)
G588364 NA non-coding upstream 1573 24458223 ~ 24458487 (+)
G588300 NA non-coding upstream 57008 24335435 ~ 24403052 (+)
G588263 NA non-coding upstream 180724 24278943 ~ 24279336 (+)
G588115 NA non-coding upstream 185264 24180245 ~ 24274796 (+)
G588368 NA non-coding downstream 863 24461134 ~ 24462883 (+)
G588372 NA non-coding downstream 15925 24476196 ~ 24492509 (+)
G588538 NA non-coding downstream 48611 24508882 ~ 24509314 (+)
G588546 NA non-coding downstream 56716 24516987 ~ 24517435 (+)
G588565 NA non-coding downstream 69232 24529503 ~ 24529709 (+)
G587660 NA other upstream 652060 23807722 ~ 23808000 (+)
G586685 NA other upstream 1444940 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 1756239 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 2099833 22356500 ~ 22360232 (+)
G588755 NA other downstream 444060 24904331 ~ 24905581 (+)
G589734 NA other downstream 1143334 25587088 ~ 25608606 (+)
G589933 NA other downstream 1543659 26003930 ~ 26025309 (+)
G590936 gart other downstream 2092283 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 2117136 26577407 ~ 26577933 (+)

Expression


Co-expression Network