Gene
RNA
| Item | Value |
|---|---|
| gene id | G588660 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 24686132 ~ 24686362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU671334 | True | 231 | lncRNA | 0.35 | 1 | 24686132 | 24686362 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gja5b | LOC106574307 | coding | upstream | 102518 | 24573406 ~ 24583614 (+) |
| LOC110527543 | LOC106575235 | coding | upstream | 310380 | 24358668 ~ 24426341 (+) |
| LOC110527542 | LOC106574301 | coding | upstream | 334131 | 24309838 ~ 24352001 (+) |
| LOC110527540 | LOC106533352 | coding | upstream | 1065081 | 23609520 ~ 23621369 (+) |
| LOC110527538 | LOC106575225 | coding | upstream | 1368662 | 23306816 ~ 23317470 (+) |
| setd4 | setd4 | coding | downstream | 37264 | 24723626 ~ 24732898 (+) |
| itsn1 | LOC100286499 | coding | downstream | 51835 | 24738197 ~ 24800444 (+) |
| LOC110527557 | pknx1 | coding | downstream | 125013 | 24811375 ~ 24820304 (+) |
| pdxkb | LOC106574311 | coding | downstream | 150922 | 24837284 ~ 24870911 (+) |
| LOC110527559 | plcc | coding | downstream | 186059 | 24872421 ~ 24902570 (+) |
| G588580 | NA | non-coding | upstream | 131085 | 24554798 ~ 24555047 (+) |
| G588575 | NA | non-coding | upstream | 136270 | 24547453 ~ 24549862 (+) |
| G588567 | NA | non-coding | upstream | 147192 | 24538686 ~ 24538940 (+) |
| G588565 | NA | non-coding | upstream | 156423 | 24529503 ~ 24529709 (+) |
| G588546 | NA | non-coding | upstream | 168697 | 24516987 ~ 24517435 (+) |
| G588664 | NA | non-coding | downstream | 4994 | 24691356 ~ 24691566 (+) |
| G588665 | NA | non-coding | downstream | 7228 | 24693590 ~ 24693875 (+) |
| G588622 | cbr1 | non-coding | downstream | 8459 | 24694821 ~ 24723107 (+) |
| G588676 | NA | non-coding | downstream | 23957 | 24710319 ~ 24711064 (+) |
| G588687 | NA | non-coding | downstream | 114222 | 24800584 ~ 24802867 (+) |
| G587660 | NA | other | upstream | 878132 | 23807722 ~ 23808000 (+) |
| G586685 | NA | other | upstream | 1671012 | 23010061 ~ 23015120 (+) |
| LOC110527523 | stat1-2 | other | upstream | 1982311 | 22684527 ~ 22722539 (+) |
| c7h10orf53 | cssa17h10orf53 | other | upstream | 2325905 | 22356500 ~ 22360232 (+) |
| G588755 | NA | other | downstream | 217969 | 24904331 ~ 24905581 (+) |
| G589734 | NA | other | downstream | 917243 | 25587088 ~ 25608606 (+) |
| G589933 | NA | other | downstream | 1317568 | 26003930 ~ 26025309 (+) |
| G590936 | gart | other | downstream | 1866192 | 26552554 ~ 26553542 (+) |
| G590949 | LOC106575121 | other | downstream | 1891045 | 26577407 ~ 26577933 (+) |
