Gene
RNA
| Item | Value |
|---|---|
| gene id | G588717 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 24832755 ~ 24833011 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU671400 | True | 257 | lncRNA | 0.43 | 1 | 24832755 | 24833011 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527557 | pknx1 | coding | upstream | 12451 | 24811375 ~ 24820304 (+) |
| itsn1 | LOC100286499 | coding | upstream | 32311 | 24738197 ~ 24800444 (+) |
| setd4 | setd4 | coding | upstream | 99857 | 24723626 ~ 24732898 (+) |
| gja5b | LOC106574307 | coding | upstream | 249141 | 24573406 ~ 24583614 (+) |
| LOC110527543 | LOC106575235 | coding | upstream | 457003 | 24358668 ~ 24426341 (+) |
| pdxkb | LOC106574311 | coding | downstream | 4273 | 24837284 ~ 24870911 (+) |
| LOC110527559 | plcc | coding | downstream | 39410 | 24872421 ~ 24902570 (+) |
| LOC110527561 | LOC106575089 | coding | downstream | 164911 | 24997922 ~ 25115994 (+) |
| LOC110527563 | alg11 | coding | downstream | 366155 | 25199166 ~ 25278853 (+) |
| spp2 | spp2 | coding | downstream | 370109 | 25203120 ~ 25213611 (+) |
| G588716 | NA | non-coding | upstream | 2457 | 24830088 ~ 24830298 (+) |
| G588687 | NA | non-coding | upstream | 29888 | 24800584 ~ 24802867 (+) |
| G588622 | cbr1 | non-coding | upstream | 109648 | 24694821 ~ 24723107 (+) |
| G588676 | NA | non-coding | upstream | 121691 | 24710319 ~ 24711064 (+) |
| G588665 | NA | non-coding | upstream | 138880 | 24693590 ~ 24693875 (+) |
| G588720 | NA | non-coding | downstream | 2587 | 24835598 ~ 24835868 (+) |
| G588764 | NA | non-coding | downstream | 89266 | 24922277 ~ 24922579 (+) |
| G588765 | NA | non-coding | downstream | 90638 | 24923649 ~ 24924230 (+) |
| G588766 | NA | non-coding | downstream | 92920 | 24925931 ~ 24926133 (+) |
| G589081 | NA | non-coding | downstream | 135162 | 24968173 ~ 24968378 (+) |
| G587660 | NA | other | upstream | 1024755 | 23807722 ~ 23808000 (+) |
| LOC110527540 | LOC106533352 | other | upstream | 1211386 | 23609520 ~ 23621369 (+) |
| G586685 | NA | other | upstream | 1817635 | 23010061 ~ 23015120 (+) |
| LOC110527523 | stat1-2 | other | upstream | 2128934 | 22684527 ~ 22722539 (+) |
| c7h10orf53 | cssa17h10orf53 | other | upstream | 2472528 | 22356500 ~ 22360232 (+) |
| G588755 | NA | other | downstream | 71320 | 24904331 ~ 24905581 (+) |
| G589734 | NA | other | downstream | 770594 | 25587088 ~ 25608606 (+) |
| G589933 | NA | other | downstream | 1170919 | 26003930 ~ 26025309 (+) |
| G590936 | gart | other | downstream | 1719543 | 26552554 ~ 26553542 (+) |
| G590949 | LOC106575121 | other | downstream | 1744396 | 26577407 ~ 26577933 (+) |
